Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00793 ATGTTCTCAATTGCAGCTATCAATGACACTGACTCGAAAAGTCAGTGGGAACCCCTAGCTCCCACGAAAGAAGCACAGGAATTTCATCTTTCCCAAACTTATCATGAAGGACTTCTCAAGTTACAAGCAAAAGAGTATGAGAAGGCTCGCGAGCTCTTAGAATCTGTCCTTAAAGATCCTCTTATTGCTAATGCTCAGGTGGATAGTAGTGCCAGTGATGGTCATCTATTGCAACTCAGATTTTTGGCATTGAAAAACCTTGCCGCTGTTTTTCTTCAGCAAGGCTCTACACATTATGAGAATGCTCTACGATGTTATCTTCAAGCTGTGGAGATTGATTCTAAAGATTCTGTTGTCTGGAACCGGCTGGGAACACTGTCATGCTTGATGGGCTCACTGAGTATTTCACGTTGGGCATTTGAGCAAGGACTCTCATGTAGCCCTAATAACTGGAATTGCATGGAGAAGCTTTTGGAAGTTCTTATTGCAATTGGTGATGAGGTTGCTTGCCTTTCTGTCTCTAAATTGATTTTGAGGCACTGGCCCTCGCATTCTCGTGCTTTGCATGTTAGAAATACCATCGAAGAATCAGAACCTTTGCGATTTGCTCCAAGAGGCATAGACAAATTGGAACCTCAACATGTGCGGCTCAAATTTCCTGACAAGAGGAAAGCTACTAATGAGAATGTAGATGAGGATGTTGCATTCAAAAAGCTGAACCAGAATAAAGAACTGCACCTGACAGAAGTTTCCTGGGTGGCTCTTGCTGATGCACTTCTGGAAATCTTATCACCACAAAGTTCCAAGATGGATCCTGAAAAAGCATTCAGTTCTCCTGATATTAGGCTAAGCATAATCTTACCTAGTAGCTCAGAAGCTGTTATGAACACTGTGGAAATGAAAGGGTCCAATTGTGAAAATAGTGTTTCTGGTGATGGTAACATAGAACGATCAAGTGCTTTTAAAGAGAAAGAAGCTAATATCCAAGAAGAACAACCGCATGAAAGGCGAAGTTCTCGACTTGAAAGGCTCCGGAGTCGTAAACCAGGGAAAGAAGAATCTGATTCTTCTTGTGGAAAGGACCCTACCAAGGTTGTCATTCAATATTTAGAGCCATTTATTTCTGGTGGATTGGGGGGTCAAGATACAATTGATAGAGATACCACGAAAGTATCCTGTTTAGGAAATTCTGAATATTATAATGTTTCTGCATTTTTAAGAGAAACTTCAAACAATTATGGTGCTTATCATATGGGGCACTTGCTTTTAGAAGAAGTTGCAAGACAAGGTCTCACATATCAGGATGCTTTTGTCAAATTTTTGGAGTTGGAAAAGTTGACAAGGCATTGGGGAAAGGAGAGAACTGCTGAATGTAATATTTTTCTTGCTGAGCTGTATTATGACTTTGGGTCATGCTCCCCCACTGGTTCTAAACAATTGGAATTTATTTCTGAGACGTCTTATCATCTTTGTAAGATTATAGAATCTGTAGCTTTAGATTATCCTTTTCACTTGACTCATGCCTTGAATGAAAATAGTTTTTCAATAGATAGTAACCAAGAGACCCATGGAAAAACAATAAATACCTCGACTGAGAGCAATTCAAATTTAGACAGCTCACTTCTGATGAAAAACTGTCCCCTTTGGTCTCGATTCTTCTGGCTAAGTGGGAGATTGTCTATTGTTGATGACAACAGGGCAAAAGCATGTCAAGAATATTGTATTGCTTTGACACTTTTGGCGAAGAGAGAAAAGGAAAATTCTCTATGTTCAGTCCCCCGCCCACATTGCAAGGCTGTAAAAGAGCTAAACTTTGATAGAGTTCTTGATGAAATTAATATATTAAAGGTCAATTTCTTGATGGAAAAGTCTGTCATTAAGATGATGGAACAAGAAAAGTTTTTGGAGTGTGTATCCCTGCTTTCTCCACTTCTATTCTCCACACAGGATGTCTACCCCAATTCATTCTCTTTATCCATGACTGATAAAAGAGATGAAAAGATAACTTCCACTGAACTTATGGCTGTAGATGTTCTAATGGAAGCATGTCAAAAAACAAAGCCAATGGATGTAGAGATGTATTTTAATTGTCATTATAGAAAGCTGAAAATACTTATGACAAAGATGGGTTTAAAGACATGTATTACATCATTTAAGTCTTCTGATCAAGCACCTATTTTAACTGTGTCTCCTAATTTTGATATTGATTCAAAGGAAAGTTCTAGCAAGAACTGTAGTCACTTGGTCACGGATGAAGTGAAGGCACTCTCTGACTGTATTTCACAAGTGAAGAAAATTATCGATCAACATGGAGATTCTGATGGCCTTTCTGTTCCAACAAGCAGCATTTGTCAAATGCAATCCCTGCTGTTGTTAATCATGAGCTATGTTGGCAACATACTTGCCCTCAACAAAGCCTCAGCACAAGTAATTTCTGATCAAGCTGAAAGCAGCTGTTTCGTTGATGCAGCCATTGTTTTCTGCAAACTCCAGCATCTTAGCCCAACCATGCCTATCAAGACTCAAGTTGATTTAATTGTTGCAACACATGACTTGCTTGCTGAATATGGGCTTTGCTGTTTGGGTGAAGGTGGCAAAGGTGAAGAAGGAACATTTCTTAGATTTGCGATAAAGCATCTCTTGGCCTTGGATACGAAGCTTAAATCCAGCTTTAACCATAAAGAATCAATGCAATGTGAAGAAGTGTCCAAAAACAGTCTCGTCAATGTGTCTGTTGAAGAATCAAAATTGGATGCATTAGACATCCAGATGGATTTGACCAAAATTGATGAAATTAATTCAGAGAAAAAGGATGTTTCTGAAGGAATAATATCCAAAGGCATTTCATCTTGCAGAGTTCATGATAAAGACGGTAAGGAAGTAGAGTTTGAAAATCATGGAGGTGCTGGCACTGGCAGTAAGTTAATTAAGGGCGAAAATTTAAGCAATCAATTGATTGAATGTGAAGATGAACTTTCTGAATATGAACGGGAGGAACTTGAGTCTAAAATTGACTGTGCCTTAGATCAGTGCTTTTTCTGTTTATATGGATTACATCTGAGATCTGATTCATCTTATGAGGATGATCTAGTGGTGCACAAAAACACAAGCCGAGGAGATTATCAAACCAAGGAACAATGTGCTGATGTTTTCAAGTATGTTCTTCCCTATGCAAAGGCATCTTCTAGGACTGGACTGGTCAAACTTCGTAGAGTTTTAAGAGCTATTAGGAAGCACATTCTGCAGCCACCAGAGGACCTCTTGGCAGGAAACCCTATTGATAAGTTCTTAGATGATCCTAATCTATGTGAAGATAAGCTCTCAGAGGAGGCTGGGTCTGATGGGTTTCTTGAATCTATTACTAAGAGAATGTTTCCTGATGTGGGTGGCCTTGCTCAGTATAATGCAACATTATTGAGGAGGTCTGAGCCATATTTGGAGGTATACTGTAACTTGTATTATTTCTTGGCTCTGTCTGAGGAAATGAGTGCAACAGATAAGTGGCCTGGATTTGTGCTGACCAAGGAAGGGGAAGAATTTGTTGAACAAAATGCAAAGCTCTTCAAATATGATCTCATGTACAATCCTCTGCGCTTTGAAAGCTGGCAGAGACTTGGAAATATTTATGATGAGGAAGTAGATTTGTTACTAAATGATGGTAGCAAGCACGTTAATGTAGTAGGGTGGAGGAACAATGCTACTTTATCCGAGAGAGTGGAAACAAGCCGAAGGAGGAGTAGACGGTGCCTACTAATGAGTTTAGCTTTGGCAAATACATCTGCTCAGCAGTGTGAGATACACGAGTTATTGGCATTGGTGTACTACGACAGTCTTCAAAATGTAGTCCCATTTTATGATCAGAGATCTGCTTTGCCCTTAAAGGATGCGGCATGGATGATGTTTTGTGAGAACTCAATGAAGCATTTTAAGAAAGCCTTCGCACTTAAGCAAGATTGGTTGCATGCCTTTTACTTGGGTAAACTCAGCAAAAAACTTGGATATTCACACGAAATTGCATTATCATATTACAATAAAGCTATTGCTTTGAACACATCAGCTGTTGATCCTGTCTATAGGATGCATGCCTCACGTTTGAAATTATTATTTAAGTGTGGAAAGCAGAATTTGGAGATTTTGAAGGTTCTCTCGGCAAACTCCTTTAATCAATCTGTAAAAGAAGCTGTCACAAGTATTCTTATTGGTATTGATAGCTCATTTTTAAATACAAAGGAGAGACATATTGATGCCAATTTTGTGGAAACAAAGCATGAAGAGTTGCTCAAATTGGATACAGTATGGTCTATGCTTTACAATGATTGCCTTTCTGCTCTTGAAACATGCGTAGAGGGGGATCTCAAACATTTCCATAAGGCCAGATACATGCTGGCTCAAGGACTGTACAAAAGAGGTGAGAGTGGTGATATAGAGAGGGCAAAAGATCATCTATCTTTCTGCTTCAAATCTTCACGCTCATCATTTACAATAAATATGTGGGAAATTGATAGCACAGTAAAAAAAGGAAGgcgcaagacaccagGTACTGCTGGGAACAAAAAATCCCTTGAGGTTAACTTacctgaaagttctcgaaaatttattacttgcattcgaaagtatttgctgttttatctcaaactattggaagagactggagatagatgTATTCTCGAACGTTCATATGTTGCTCTTCGTGCagataaacggttttcattatgtattgaagatcttataccagtggctatcggaaggtatctaaaggccctgatttcaactatgtgccattctcagactactgcctctggttcagtgagcagttctaacaatgtgctggagagaatgtttgcattgttcatggagcaagggagcttatggccagaaatatgcagtttgcccgaaattgaaggctcagatatgtcagagactatcatatatggATATCTTCATGAACATATTGTATTGTTGGAGAAAAATGGAAAACTGGAAACTCTTGAAGCAACAAATGAGAAGATTAGGAAGCGTTCTAAGAATCCAAAGTTCTCAGACAGTAATTGTGCAAAAGTTGGCAAGCATGCTTCTGTTGCTTGGTGTCGATCTCTTGTATATAATTTGGCACAAATAACTCCATTATCTTGTGAATTCTCAAATGGGATTCAGGTCCTTAGTTTGACTGATGGTGGGATGGATAATAGCCAGTTGCTCTGTATTGATTTGCAGCCAAAAGAATTATGGAGTACAGCTTTTGAAGATCCAACTCATTTAGAAAAGATTGAAACAAAATGGAGCACTATTTTATCTAAAGTAAAAAATATTATTATCAAGAAAGCTTCTGATGAGAATTTGGAAACTGCAAACACTTTGCTCAGAGCTTGCTATAATTTTTACCGGGAGAGTTCTTCTGTAGTGCTTACCTCTGGACTCAACTTTTATTTGATTCCATCTCAATCAGTAACACAGACACCATTCAACCCAAGTACTGCTGGGATTGAAGCACTTGATCTGAGCATACCAAGGAAGCTTCTCTTGTGGGCCTACGTGCTATCCCATGGACGTTGTGCAAATATCTCAATTGTTGTAAAGCATTGTGAAGAAATGTCGAAGTCCAAGATGAAAAGAGGAAGTGGAACGTCACCTGCGTTATCAAACACATCTCCTGCCCCTAGTCTTCCAGGTAGCGGTAAAAATGGACCAAATTCTGCCGGAGGCATTGACGTTGATTCTGCACATGTCACAACAGTGGGGTCCGGTTCAGTTTCTAGTGGCAATACCACTAATTTTGTGAATTCACTTCCTTCATATGACATTCAGAAAAATCTCTTTGCTTCTCCCCAGCTGCATCAATGCACCAGTAACGATGCAGAACGAAGCAATTTGGTAGCACTTGAAGGAGATACAGAGGGAGATTGA 5904 0.3697 MFSIAAINDTDSKSQWEPLAPTKEAQEFHLSQTYHEGLLKLQAKEYEKARELLESVLKDPLIANAQVDSSASDGHLLQLRFLALKNLAAVFLQQGSTHYENALRCYLQAVEIDSKDSVVWNRLGTLSCLMGSLSISRWAFEQGLSCSPNNWNCMEKLLEVLIAIGDEVACLSVSKLILRHWPSHSRALHVRNTIEESEPLRFAPRGIDKLEPQHVRLKFPDKRKATNENVDEDVAFKKLNQNKELHLTEVSWVALADALLEILSPQSSKMDPEKAFSSPDIRLSIILPSSSEAVMNTVEMKGSNCENSVSGDGNIERSSAFKEKEANIQEEQPHERRSSRLERLRSRKPGKEESDSSCGKDPTKVVIQYLEPFISGGLGGQDTIDRDTTKVSCLGNSEYYNVSAFLRETSNNYGAYHMGHLLLEEVARQGLTYQDAFVKFLELEKLTRHWGKERTAECNIFLAELYYDFGSCSPTGSKQLEFISETSYHLCKIIESVALDYPFHLTHALNENSFSIDSNQETHGKTINTSTESNSNLDSSLLMKNCPLWSRFFWLSGRLSIVDDNRAKACQEYCIALTLLAKREKENSLCSVPRPHCKAVKELNFDRVLDEINILKVNFLMEKSVIKMMEQEKFLECVSLLSPLLFSTQDVYPNSFSLSMTDKRDEKITSTELMAVDVLMEACQKTKPMDVEMYFNCHYRKLKILMTKMGLKTCITSFKSSDQAPILTVSPNFDIDSKESSSKNCSHLVTDEVKALSDCISQVKKIIDQHGDSDGLSVPTSSICQMQSLLLLIMSYVGNILALNKASAQVISDQAESSCFVDAAIVFCKLQHLSPTMPIKTQVDLIVATHDLLAEYGLCCLGEGGKGEEGTFLRFAIKHLLALDTKLKSSFNHKESMQCEEVSKNSLVNVSVEESKLDALDIQMDLTKIDEINSEKKDVSEGIISKGISSCRVHDKDGKEVEFENHGGAGTGSKLIKGENLSNQLIECEDELSEYEREELESKIDCALDQCFFCLYGLHLRSDSSYEDDLVVHKNTSRGDYQTKEQCADVFKYVLPYAKASSRTGLVKLRRVLRAIRKHILQPPEDLLAGNPIDKFLDDPNLCEDKLSEEAGSDGFLESITKRMFPDVGGLAQYNATLLRRSEPYLEVYCNLYYFLALSEEMSATDKWPGFVLTKEGEEFVEQNAKLFKYDLMYNPLRFESWQRLGNIYDEEVDLLLNDGSKHVNVVGWRNNATLSERVETSRRRSRRCLLMSLALANTSAQQCEIHELLALVYYDSLQNVVPFYDQRSALPLKDAAWMMFCENSMKHFKKAFALKQDWLHAFYLGKLSKKLGYSHEIALSYYNKAIALNTSAVDPVYRMHASRLKLLFKCGKQNLEILKVLSANSFNQSVKEAVTSILIGIDSSFLNTKERHIDANFVETKHEELLKLDTVWSMLYNDCLSALETCVEGDLKHFHKARYMLAQGLYKRGESGDIERAKDHLSFCFKSSRSSFTINMWEIDSTVKKGRRKTPGTAGNKKSLEVNLPESSRKFITCIRKYLLFYLKLLEETGDRCILERSYVALRADKRFSLCIEDLIPVAIGRYLKALISTMCHSQTTASGSVSSSNNVLERMFALFMEQGSLWPEICSLPEIEGSDMSETIIYGYLHEHIVLLEKNGKLETLEATNEKIRKRSKNPKFSDSNCAKVGKHASVAWCRSLVYNLAQITPLSCEFSNGIQVLSLTDGGMDNSQLLCIDLQPKELWSTAFEDPTHLEKIETKWSTILSKVKNIIIKKASDENLETANTLLRACYNFYRESSSVVLTSGLNFYLIPSQSVTQTPFNPSTAGIEALDLSIPRKLLLWAYVLSHGRCANISIVVKHCEEMSKSKMKRGSGTSPALSNTSPAPSLPGSGKNGPNSAGGIDVDSAHVTTVGSGSVSSGNTTNFVNSLPSYDIQKNLFASPQLHQCTSNDAERSNLVALEGDTEGD 1967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00793 1967 Coils Coil 978 998 - -
Gma04g00793 1967 Coils Coil 39 59 - -
Gma04g00793 1967 MobiDBLite consensus disorder prediction 1868 1906 - -
Gma04g00793 1967 MobiDBLite consensus disorder prediction 1870 1894 - -
Gma04g00793 1967 MobiDBLite consensus disorder prediction 322 360 - -
Gma04g00793 1967 MobiDBLite consensus disorder prediction 322 359 - -
Gma04g00793 1967 Gene3D Tetratricopeptide repeat domain 6 194 IPR011990 GO:0005515
Gma04g00793 1967 PANTHER CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED 1 1947 IPR033053 -
Gma04g00793 1967 Coils Coil 1653 1673 - -
Gma04g00793 1967 SUPERFAMILY TPR-like 33 169 IPR011990 GO:0005515
Gma04g00793 1967 SMART tpr_5 81 116 IPR019734 GO:0005515
Gma04g00793 1967 SMART tpr_5 117 150 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00793 Gma-Chr4 7552178 7563502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00793 K17613 - gmx:100783154 3822.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00793 04 7552178 7563502 Gma04g00793 04 7552178 7563502 ECH
Gma04g00793 04 7552178 7563502 Gma06g00788 06 7143417 7154769 GST