Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00790 ATGCCGTCCAACGATTCCGATTCGCCGATGAAGATCGTACATGGCGACGCTGGTTACATACTCGAAGACGTTCCTCACTTCACCGACTACATTCCAAATCTTCCTACGTATCCGAATCCGCTTCGATCCAATCCTGCTTACTCGGTTGTTAAGCAGTATTTCGTGCACATGGACGACACTGTTCCTCAGAAGGTTGTTGTTCACAAGGATAGTCCAAGAGGTATACATTTTCGACGTGCAGGGCCTCGGCAAAAGGTATACTTTAAATCGGATGAAGTGCATGCATGCATTGTCACGTGTGGTGGACTCTGCCCTGGCCTCAACACTGTCATAAGGGAAATTGTCTGTGGTCTTTCCTACATGTACGGTGTTAACAAAGTCCTTGGCATAGATGGTGGTTATAGAGGCTTTTATTCCAAAAACACCATTACTTTAACACCTAAGGTGGTCAATGACATCCATAAGCGTGGGGGTACAATTCTTGGGACATCCCGAGGGGGGCATGATACGGGCAAGATAGTTGACAGCATCCAGGATCGAGGAATTAATCAGGTTTATATTATTGGAGGAGATGGAACACAGAGAGGAGCGACTGTGATTTACGAGGAAGTTAGACGGCGGGGTCTGAAAGTAGCAATTGCTGGAATTCCTAAAACCATAGACAATGACATCCCGGTTATTGACAAATCTTTTGGTTTTGATACTGCGGTTGAGGAGGCTCAACGTGCCATTAATGCAGCTCATGTTGAAGCTGAAAGTATTGAGAATGGTATTGGTGTTGTAAAGCTAATGGGGCGTTATAGTGGTTTTATTGCAATGTATGCCACTCTTGCTAGCAGAGACGTGGACTGTTGCTTGATTCCAGAGTCGCCCTTCTACCTTGAAGGAAAGGGTGGACTTTTTGAATTTATTCAGAAAAGGCTGAAAGAAAATGGACATATGGTCATAGTCATAGCTGAGGGAGCAGGACAAGATCTTCTTACAGAAAGCATGCAAGCCATGGATCAGAAGGATGCTTCTGGAAACAAACTACTTCAAGATGTTGGTTTATGGATATCTCATAAGATCAAGGATCACTTTGCAAGGAAGGATAAGATTCCCATCAATCTTAAATATATAGATCCAACTTACATGATCCGGGCAATCCAAAGCAATGCATCAGATAATGTCTACTGTACACTTCTTGCTCAGAGTGCAGTCCATGGTGCAATGGCAGGGTATACTGGATTTACAGTTGGACTGGTCAACGGCAGACATACTTATATTCCATTCAATAGAATCAATGAGAGGCAGAACAAGGTTGTGATTACTGACAGAATGTGGGCAAGACTCCTTTCTTCAACCAACCAGCCTAGCTTTTTGAGCCCCAAAGATTTAGAAGAAGCCAAGAAAGCAGAACAACCTCCGACTGAATTGTTGGAAGGAAACAATTGCAATGATGTTGGTGATGCCGGGAAAGAAGAACAACCTCCCAAAGATGAACAAGAATCAGGAAATCACGCAGACAATGGTATCAAGACAGAAAATTAG 1530 0.4366 MPSNDSDSPMKIVHGDAGYILEDVPHFTDYIPNLPTYPNPLRSNPAYSVVKQYFVHMDDTVPQKVVVHKDSPRGIHFRRAGPRQKVYFKSDEVHACIVTCGGLCPGLNTVIREIVCGLSYMYGVNKVLGIDGGYRGFYSKNTITLTPKVVNDIHKRGGTILGTSRGGHDTGKIVDSIQDRGINQVYIIGGDGTQRGATVIYEEVRRRGLKVAIAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIQKRLKENGHMVIVIAEGAGQDLLTESMQAMDQKDASGNKLLQDVGLWISHKIKDHFARKDKIPINLKYIDPTYMIRAIQSNASDNVYCTLLAQSAVHGAMAGYTGFTVGLVNGRHTYIPFNRINERQNKVVITDRMWARLLSSTNQPSFLSPKDLEEAKKAEQPPTELLEGNNCNDVGDAGKEEQPPKDEQESGNHADNGIKTEN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00790 509 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 24 454 IPR012004 GO:0003872|GO:0005524|GO:0006096
Gma04g00790 509 Pfam Phosphofructokinase 96 401 IPR000023 GO:0003872|GO:0006096
Gma04g00790 509 PRINTS ATP-dependent phosphofructokinase family signature 97 116 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gma04g00790 509 PRINTS ATP-dependent phosphofructokinase family signature 181 197 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gma04g00790 509 PRINTS ATP-dependent phosphofructokinase family signature 214 231 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gma04g00790 509 PRINTS ATP-dependent phosphofructokinase family signature 232 250 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gma04g00790 509 PRINTS ATP-dependent phosphofructokinase family signature 253 269 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gma04g00790 509 PRINTS ATP-dependent phosphofructokinase family signature 310 322 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gma04g00790 509 MobiDBLite consensus disorder prediction 485 509 - -
Gma04g00790 509 PIRSF ATP_PFK_TP0108 1 458 IPR012004 GO:0003872|GO:0005524|GO:0006096
Gma04g00790 509 SUPERFAMILY Phosphofructokinase 27 462 IPR035966 GO:0003872|GO:0006096
Gma04g00790 509 Coils Coil 237 257 - -
Gma04g00790 509 MobiDBLite consensus disorder prediction 452 509 - -
Gma04g00790 509 Gene3D - 90 279 - -
Gma04g00790 509 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 8 483 - -
Gma04g00790 509 PANTHER - 8 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00790 Gma-Chr4 7516437 7523819 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00790 K00850 - gmx:100818755 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00790 04 7516437 7523819 Gma04g00790 04 7516437 7523819 ECH
Gma04g00790 04 7516437 7523819 Gma06g00786 06 7122034 7128716 ECH