Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00780 ATGCCCATAGAAACATGTTACCATCAACTCGAGGGTGTTCCAGGTCAACCGGGCCTAATCCGCTACTACTGTGCTTCCACCGTCGAAGAAGGAACCATCATGTGGGCCAAAGAGAAGCTGCTTGCAGTCGATCCCGTCCAATGTTGTTTGTCATATGAAATTGTTGACAACAACGTCGGATTTAAGTCAAATGTGGCAACACTCAAAGTGCTGCCAATGAATGGAGATGGATCCATGATAGAGTGGGGGTTTATCTGTGATCCAGTTGAAGGTGGAGTTTACAAGAtttga 291 0.457 MPIETCYHQLEGVPGQPGLIRYYCASTVEEGTIMWAKEKLLAVDPVQCCLSYEIVDNNVGFKSNVATLKVLPMNGDGSMIEWGFICDPVEGGVYKI 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00780 96 Pfam Polyketide cyclase / dehydrase and lipid transport 9 92 IPR019587 -
Gma04g00780 96 CDD PYR_PYL_RCAR_like 3 91 - -
Gma04g00780 96 Gene3D - 1 95 IPR023393 -
Gma04g00780 96 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 2 91 - -
Gma04g00780 96 PANTHER - 2 91 - -
Gma04g00780 96 SUPERFAMILY Bet v1-like 10 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00780 Gma-Chr4 7396677 7396967 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00780 - - gmx:100798368 149.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00780 04 7396677 7396967 Gma04g00780 04 7396677 7396967 ECH
Gma04g00780 04 7396677 7396967 Gma06g00773 06 7014041 7017112 GST