Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00770 ATGGAATCCCGTGCCTTCAATTCCAATTCTCCATACCATTACCATCACCACCCTCGTTTCAAACCAAGCCAACCCATCTCAGACCGAATAGTTCGCGCCCTCCGCCACCGCCTGCGCCTCCTCCACCGTTCCGGCTCCACCTTCTTCATATTAGGCGCCACCGGAAACGTGTACACGGTGACCCTATCCTCCTCACCCTCATGCACCTGCCCTGACCGCACAACCCCATGCAAGCACATCCTCTTCGTCTTAATTCGAGTTTTAGGCGTGTCCCTCGATGATGTGTGTCTGAGGAGGAGGACCCTTCGTCCCTGCCAGCTCCAACGCCTCCTCGGAACACCCACATTGCCGGAGGCGGTGGCGGGGGGCACCCTGAGGCAGAGGTTTCACCAGCTTTTCTTTAGTGGAGGGTCAACAGAGACAAAGATAGAGATGGAGGAGGGTGCCACGTGCCCGGTTTGCCTTGAGGAAATGGGGAAGGAGCAAAACCTGGTGGCATGTGGAACATGCCGTAACCCAATTCATGAAGAGTGCTTGATGAAGTGGAAGAGGACCAAGGGAAGAAGTGCTAGCTGTGTTATTTGTAGAGCAAGGTGGAGGGATAGGGTGGAGCAAGATGAGTATCTGAACCTGTCTGCTTATGTTGGCGAAGATGATGTGGAACAACCTGATGTCTGCACTTGTTAA 687 0.5415 MESRAFNSNSPYHYHHHPRFKPSQPISDRIVRALRHRLRLLHRSGSTFFILGATGNVYTVTLSSSPSCTCPDRTTPCKHILFVLIRVLGVSLDDVCLRRRTLRPCQLQRLLGTPTLPEAVAGGTLRQRFHQLFFSGGSTETKIEMEEGATCPVCLEEMGKEQNLVACGTCRNPIHEECLMKWKRTKGRSASCVICRARWRDRVEQDEYLNLSAYVGEDDVEQPDVCTC 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00770 228 ProSiteProfiles Zinc finger RING-type profile. 151 196 IPR001841 -
Gma04g00770 228 PANTHER - 13 220 - -
Gma04g00770 228 Pfam Ring finger domain 150 196 IPR001841 -
Gma04g00770 228 SUPERFAMILY RING/U-box 142 202 - -
Gma04g00770 228 Pfam SWIM zinc finger 58 86 IPR007527 GO:0008270
Gma04g00770 228 ProSiteProfiles Zinc finger SWIM-type profile. 58 88 IPR007527 GO:0008270
Gma04g00770 228 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 13 220 IPR039903 GO:0061630
Gma04g00770 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 213 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00770 Gma-Chr4 7265104 7265790 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00770 - - gmx:100775505 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00770 04 7265104 7265790 Gma04g00770 04 7265104 7265790 ECH
Gma04g00770 04 7265104 7265790 Gma06g00762 06 6902242 6905294 GST