Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00739 ATGGCGAACCAAGACTTCGAAGAGCGCTCGCAGCAACCGCAGGAGCTAGGGTACGACCCGAACTTTGTCCCCGACTCGGTAAAATCTTTTGTGGTTCACCTGTACCGTCACATCCGTGAAAAGAACGTGTACGAGATCCACCAGATGTACGAGAGCTCCTTCCAGACCCTCTCGGAGCGTCTCTTCAAGGATACCCCGTGGCCCTCCGTGGACGCCGTCGCGCACTACGTCGACAACGACCACGTCTTCTGCCTCCTCTACCGCGAGATGTGGTTCCGCCACCTCTACGCTCGTCTCACTCCGACGCTCCGCCAGCGCATCGACTCGTGGGACAACTACTGCAGCCTCTTCCAGGTTGTCCTCCACGGGGTCGTCAACATGCAGCTCCCCAACCAGTGGCTATGGGACATGGTCGACGAGTTCGTCTACCAGTTCCAGAGCTTCTGCCAGTACCGTGCCAAGATGAAGAGCAAGACTGAACAAGAAATCGCCCTCTTGCGCCAGTTCGACCAGGCCTGGAATGTTTTCGGGGTCCTCAACTTCCTCCAGGCGCTGGTGGAGAAGAGTGCCATTATTCAGATTCTGGAGCAGGAGAAGGAGGGGCTCGAGCAGTTTACCGCGACCGATGGTTATGATTACAATGGGGGGAGCAATGTGCTGAAGGTGTTGGGGTATTTTAGCATGGTGGGCTTGCTTAGGGTTCATTGTCTTTTGGGGGATTATCATACCGGGCTCAAGTGCTTGCTTCCTATTGATATTACTCAGCAAGGGGTTTATACCAGTGTTATTGGGAGTCACATCACCACCATTTATCACTATGGTTTCGCCAATCTCATGCTCCGCAGATATGTGGAAGCAATTCGTGAATTTAACAAAATTCTCTTGTACATCTTTAAGACAAAGCAGTATCATCAGAAATCACCCCAATATGAGCAGATACTGAAGAAAAATGAACAAATGTATGCCTTACTGGCAATTAGCCTTTCACTCTGCCCCCAAAGCAGGCTTGTTGATGAAACTGTGAACTCTCAGTTACGTGAGAAGTATGGTGAAAAGATGGTTAGAATGCAGAGGTATGATGATGAGGCATTTGCTATCTATGATGAGCTCTTCTCATATGCATGCCCCAAGTTCATTACCCCTTCAGCACCTAGTTTCGAGGAGCCTCTAGTAAATTACAATCAGGATGCCTATAGACTTCAGTTGAAACTGTTCCTTTATGAAGCAAAGCAACAACAGTTGCTATCAGGTGTCCGCACCTTCTTGAAAGTGTATTCAACAATCTCCCTCACAAAACTTGCAAGTTACATGGAAGTGGATGAACCCACCTTAAGGACTATCTTGATGACATACAAGCACAAGACACATGCTGTTGATAGTGATGGGAAAATTACATCCAATGCCGATTTAGATTTCTATATTGATGATGACACAATTCATGTTATGGAGTCTAAGCCTGCCAAACGTTATGGGGATTACTTTTTGCGTCAGATTGTCAAGCTTGAAGGGGTGATCAATGAGATGGACGGTATAAAGCTGGAGTGA 1545 0.4803 MANQDFEERSQQPQELGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYESSFQTLSERLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKSKTEQEIALLRQFDQAWNVFGVLNFLQALVEKSAIIQILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDITQQGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIFKTKQYHQKSPQYEQILKKNEQMYALLAISLSLCPQSRLVDETVNSQLREKYGEKMVRMQRYDDEAFAIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISLTKLASYMEVDEPTLRTILMTYKHKTHAVDSDGKITSNADLDFYIDDDTIHVMESKPAKRYGDYFLRQIVKLEGVINEMDGIKLE 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00739 514 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 18 513 IPR019382 GO:0003743|GO:0005737|GO:0005852
Gma04g00739 514 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT L 18 513 - -
Gma04g00739 514 MobiDBLite consensus disorder prediction 1 20 - -
Gma04g00739 514 Pfam RNA polymerase I-associated factor PAF67 105 500 IPR019382 GO:0003743|GO:0005737|GO:0005852
Gma04g00739 514 ProSiteProfiles PCI domain profile. 289 488 IPR000717 -
Gma04g00739 514 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 12 503 IPR019382 GO:0003743|GO:0005737|GO:0005852
Gma04g00739 514 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00739 Gma-Chr4 6893122 6897227 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00739 K15029 - gmx:100804691 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00739 04 6893122 6897227 Gma04g00739 04 6893122 6897227 ECH
Gma04g00739 04 6893122 6897227 Gma06g00728 06 6604171 6607966 GST