Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00738 ATGGCTTCTCACGACGGCATCTCCGCTGCTTCTTCAGATTCCGTCTTCAATCACCTCGTTCGTGCTCCCGAAGATCCTATCCTCGGGGTAACTGTTGCTTATAACAAAGATCCAAGTCCAGTTAAGCTCAACTTGGGAGTTGGTGCTTACCGAACTGAGGAAGGAAAACCTCTTGTTTTGAATGTAGTGAGGCGAGTTGAGCAGCAACTCATAAATGACGTGTCACGCAACAAGGAATATATTCCGATTGTTGGGCTAGCTGATTTTAATAAATTGAGTGCTAAGCTCATTTTTGGGGCTGACAGCCCTGCTATTCAAGACAACAGGGTTACCACTGTTCAATGCTTGTCTGGAACTGGTTCATTAAGAGTTGGGGGTGAATTTTTGGCTAAACACTATCACCAACGGACTATATACTTGCCAACACCAACTTGGGGTAATCACCCAAAGGTTTTCAACTTAGCAGGGTTGTCTGTCAAAACATATCGCTACTATGCTCCAGCAACACGAGGGCTTGATTTTCAAGGACTTCTAGAAGATCTTGGTTCTGCTCCATCTGGATCTATTGTTTTGCTACATGCATGCGCACATAACCCCACTGGTGTGGATCCAACCCTTGAGCAATGGGAGCAGATTAGGCTGCTAATAAGATCAAAAGCTTTGTTACCTTTCTTTGACAGTGCTTATCAGGGTTTTGCTAGCGGAAGTCTAGATGCAGATGCCCAGCCTGTTCGTTTGTTTGTTGCTGATGGGGGTGAATTGCTGGTGGCACAAAGCTATGCAAAGAATCTGGGTCTTTATGGGGAACGTGTTGGCGCCTTAAGCATTGTCTGCAAGTCAGCTGATGTTGCAAGCAGGGTCGAGAGCCAGCTGAAACTAGTGATTAGGCCCATGTACTCAAGTCCTCCTATTCATGGTGCATCCATTGTGGCTGCCATTCTCAAGGACCGGGATTTGTTCAATGACTGGACTATTGAGTTGAAGGCAATGGCTGATCGCATCATCAATATGCGCCAAGAACTTTTCGatgctttacgttccagagGCACACCTGGTGATTGGAGTCACATTATCAAGCAGATTGGAATGTTTACTTTCACTGGATTGAATGCGGAACAAGTTTCCTTCATGACTAAAGAGTACCATATATACATGACATCTGACGGGAGGATTAGCATGGCTGGTCTGAGTTCCAAAACTGTCCCACTTCTAGCGGATGCGATACATGCTGCTGTAGCTCGAGTTGCCTAA 1251 0.4508 MASHDGISAASSDSVFNHLVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRRVEQQLINDVSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQDNRVTTVQCLSGTGSLRVGGEFLAKHYHQRTIYLPTPTWGNHPKVFNLAGLSVKTYRYYAPATRGLDFQGLLEDLGSAPSGSIVLLHACAHNPTGVDPTLEQWEQIRLLIRSKALLPFFDSAYQGFASGSLDADAQPVRLFVADGGELLVAQSYAKNLGLYGERVGALSIVCKSADVASRVESQLKLVIRPMYSSPPIHGASIVAAILKDRDLFNDWTIELKAMADRIINMRQELFDALRSRGTPGDWSHIIKQIGMFTFTGLNAEQVSFMTKEYHIYMTSDGRISMAGLSSKTVPLLADAIHAAVARVA 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00738 416 CDD AAT_like 43 396 - -
Gma04g00738 416 PANTHER ASPARTATE AMINOTRANSFERASE 13 416 IPR000796 GO:0006520|GO:0008483
Gma04g00738 416 PRINTS Aspartate aminotransferase signature 190 209 IPR000796 GO:0006520|GO:0008483
Gma04g00738 416 PRINTS Aspartate aminotransferase signature 221 233 IPR000796 GO:0006520|GO:0008483
Gma04g00738 416 PRINTS Aspartate aminotransferase signature 289 314 IPR000796 GO:0006520|GO:0008483
Gma04g00738 416 PRINTS Aspartate aminotransferase signature 357 375 IPR000796 GO:0006520|GO:0008483
Gma04g00738 416 SUPERFAMILY PLP-dependent transferases 14 414 IPR015424 -
Gma04g00738 416 Pfam Aminotransferase class I and II 42 408 IPR004839 GO:0009058|GO:0030170
Gma04g00738 416 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 259 272 IPR004838 GO:0003824|GO:0009058|GO:0030170
Gma04g00738 416 Gene3D - 75 316 IPR015421 GO:0003824
Gma04g00738 416 Gene3D Aspartate Aminotransferase, domain 1 21 408 IPR015422 GO:0003824
Gma04g00738 416 PANTHER ASPARTATE AMINOTRANSFERASE 13 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00738 Gma-Chr4 6885528 6889787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00738 K14454 - gmx:100804162 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00738 04 6885528 6889787 Gma04g00738 04 6885528 6889787 ECH
Gma04g00738 04 6885528 6889787 Gma06g00727 06 6597444 6602401 GST