Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00731 ATGGCTCCACCGCCACCGCAGTCTCATCGATCGCCCTCACCGTCGCAACCGTCAGGGTCAAGTGAAGTCTCCGATCTGAAATCGCAGCTCCGGCAGCTAGCTGGGAGCCGAGCTCCGGGCGCTGATGATTCTAAGAGGGATCTCTTCAAGAAGGTGATTTCCAACATGACTATAGGTATTGATGTCTCATCTCTCTTTGGCGAGATGGTAATGTGCTCTGCAACGTCAGATATTGTTCTGAAAAAAATGTGCTACCTATATGTTGGGAACTATGCTAAGGTCAATCCTGATCTTGCGCTTTTGACGATTAATTTTCTGCAAAGAGATTGCAAGGATGAGGATCCAATGATTCGGGGACTAGCATTGAGGAGTTTGTGTTCGCTCCGGGTGGCAAACTTGGTGGAGTATTTGGTTGGGCCATTAGGATCTGGATTGAAGGACAATAATAGTTATGTGAGGATGGTGGCAGTTATTGGGGTTTTGAAACTATATCATATATCAGCTTCCACCTGTATTGATGCTGATTTTCCAGCAACACTGAAGCATTTGTTGCTTAATGACCCTGATGCTCAGGTAGTTGCAAATTGTTTGTCTGCTTTACAAGAAATTTGGACCTTAGAGTCATCCACATCAGAGGAAGCAGCCAGGGAGAGAGAAACTCTACTTAGCAAGCCAGTTGTATATTACCTTTTGAATCGCATTAAGGAATTTAGTGAATGGGCTCAGTGTCTTGTGCTGGAATTGGTGTCCAAGTACATTCCATCAGATAACAGTGAAATATTTGATATAATGAATCTTCTTGAAGATAGGCTCCAGCATGCAAATGGTGCTGTTGTCTTGGCAACTATTAAAGTATTTCTGCAGTTGACTTTGTCTATGGCTGATGTGCATCAGCAGGTATATGAGCGCATCAAAGCCCCTCTCTTAACTCAAGTGAGCTCAGGAAGTCCAGAACAATCTTATGCAGTTTTAAGTCACCTGCATATTTTGGTCATGCGTGCACCTTATATATTTTCCTCAGACTACAAACACTTCTATTGCCAGTATAATGAGCCATCATATGTTAAAAAGTTGAAGCTTGAAATGCTGACTGCAGTTGCAAATGAAACTAACACCTATGAGATAGTGACAGAATTATGTGAATATGCTGCAAATGTTGACATTCCCATTGCAAGGGAATCAATTCGAGCTGTTGGGAAGATAGCATTGCAGCAGTATGATGTCAATGCTATTGTTGATCGACTTCTCCAGTTTCTTGAGATGGAAAAGGACTATGTTACTTCTGAAGCTCTGGTGCTTGTGAAAGATCTGCTAAGAAAATATCCACAATGGAGTCAGGATTGTATTGCTGTTGTTGGAAATATCAGTAGTAAAAATGTCCAAGAACCCAAGGCTAAGGCAGCTCTTATATGGATGTTGGGGGAATATTCTCAGGACATGCATGATGCTCCATATGTCTTGGAGAGTTTAGTTGAAAACTGGGATGAGGAGCATTCTGCTGAGGTAGTTCGCTTACATCTTCTTACTGCAGTTATGAAGTGTTTCTTTAAGCGACCACCTGAAACTCAAAAAGCATTAGGAGCTGCATTGGCTGCTGGGCTTGCTGATTTTCACCAGGATGTTCATGATAGGGCCTTATTTTATTACAGGCTTCTGCAATACAATGTATCAGTGGCAGAGAGTGTGGTTAACCCTCCAAAGCAAGCAGTTTCAGTATTTGCTGATACTCAGAGCAGTGAAATCAAAGATCGCATATTTGATGAATTTAACAGTTTGTCTGTTGTATACCAAAAGCCTTCTTATATGTTCACTGATAAGGAACACCGAGGGACATTTGAGTTTGCAGATGAACTTGGAAATCTATCTATTAGTGCAGAATCTTCAGATTCTGTTGTTCCAGCTGAGAGAGTGGAAGCAAATGACAAGGATCTGCTTCTAAGTACTTCAGAAAAAGATGAAGGAAGAGATCCTGGTAGCAATGGTTCTGTCTATAATGCTCCTTCCTATAATGGTTCTTCTGCCCCTTCTACAACTTCACAACCACTTGCAGATTTGTCATTTCCAAGTACTGGCATATCCGGTCAAGCTCCTGCTTCTAGCTTGGCAATTGATGATCTACTTGGTTTAGATTTTCCAGTTGGGACTGCAGTCACACCTTCACCTCCTCCATTGAACCTAAACCCAAAAGCTGTACTGGATCCTGGTACATTTCAGCAGAAATGGCGTCAACTGCCAATATCCTTATCTGAGGAATATTCTCTAAGTCCTCAAGGAGTTGCATCGTTGACAACTCCTCATGCACTTCTGCGGCACATGCAAAGTCATTCAATACAATGCATTGCATCCGGTGGTCAGTCTCCCAACTTCAAGTTCTTTTTCTTTGCTCAGAAAGCAGAAGCAGCATCAATGTATCTTGTAGAGTGTATAATCAACACATCGTCAGCCAAGTCACAGATTAAAATAAAAGCTGATGACCAAAGTTCATCCCAGGCATTCTCTACTTTATTCCAATCAGCCTTGTCCAAATTTGGTTTACCTTGA 2541 0.4203 MAPPPPQSHRSPSPSQPSGSSEVSDLKSQLRQLAGSRAPGADDSKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDNNSYVRMVAVIGVLKLYHISASTCIDADFPATLKHLLLNDPDAQVVANCLSALQEIWTLESSTSEEAARERETLLSKPVVYYLLNRIKEFSEWAQCLVLELVSKYIPSDNSEIFDIMNLLEDRLQHANGAVVLATIKVFLQLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAVLSHLHILVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANETNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTSEALVLVKDLLRKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMHDAPYVLESLVENWDEEHSAEVVRLHLLTAVMKCFFKRPPETQKALGAALAAGLADFHQDVHDRALFYYRLLQYNVSVAESVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQKPSYMFTDKEHRGTFEFADELGNLSISAESSDSVVPAERVEANDKDLLLSTSEKDEGRDPGSNGSVYNAPSYNGSSAPSTTSQPLADLSFPSTGISGQAPASSLAIDDLLGLDFPVGTAVTPSPPPLNLNPKAVLDPGTFQQKWRQLPISLSEEYSLSPQGVASLTTPHALLRHMQSHSIQCIASGGQSPNFKFFFFAQKAEAASMYLVECIINTSSAKSQIKIKADDQSSSQAFSTLFQSALSKFGLP 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00731 846 MobiDBLite consensus disorder prediction 661 688 - -
Gma04g00731 846 Gene3D - 715 844 IPR012295 -
Gma04g00731 846 PANTHER ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER 17 844 IPR026739 GO:0016192
Gma04g00731 846 MobiDBLite consensus disorder prediction 1 42 - -
Gma04g00731 846 Gene3D - 15 611 IPR011989 -
Gma04g00731 846 MobiDBLite consensus disorder prediction 629 688 - -
Gma04g00731 846 Pfam Adaptin N terminal region 36 553 IPR002553 GO:0006886|GO:0016192|GO:0030117
Gma04g00731 846 PIRSF Beta_adaptin 11 846 IPR016342 GO:0015031|GO:0030276
Gma04g00731 846 MobiDBLite consensus disorder prediction 13 31 - -
Gma04g00731 846 SUPERFAMILY ARM repeat 29 600 IPR016024 -
Gma04g00731 846 MobiDBLite consensus disorder prediction 635 657 - -
Gma04g00731 846 Pfam Beta2-adaptin appendage, C-terminal sub-domain 727 840 IPR015151 GO:0006886|GO:0016192|GO:0030131
Gma04g00731 846 PANTHER AP-4 COMPLEX SUBUNIT BETA-1 17 844 - -
Gma04g00731 846 SMART B2_adapt_app_C_2 724 841 IPR015151 GO:0006886|GO:0016192|GO:0030131
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00731 Gma-Chr4 6819370 6827710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00731 - - gmx:100801153 1592.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00731 04 6819370 6827710 Gma04g00731 04 6819370 6827710 ECH
Gma04g00731 04 6819370 6827710 Gma06g00720 06 6533703 6543868 GST