Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00703 ATGGCGCGAGTATGTGCGTCTCTTACATTCCCGCCCGCGCTCCGTTTCAAGATTCAGTGCCACTCTCACTCGTCCTTCGTTATCTTCCGAGTAAACTCCCTCTACTCTCAAATTTACGGTTACCGGGGAAAGGAACAATCGGTTACTGGCAGTGTTAGGGCTTTTGAATCCTCTTCTGCTAAACCCATGAGTTGGTGTGATGGCGTTCTGGAACCACGGGTTCTCGTCGCACCCGATCCTGGTACTGATCGAAATGGTCTGGGACAGATGATATTGCTCCGCCATCCCAAATCTGGTAATGCAACACAATATCTGTTTGTAAATGGAATACTTCTAGAACTTCAGTGGTTTAAGAACTTGTATGGATCTTGGTTTTTGGGAGATTATATAACTGAAGATGGTCGGCTGTATTTATCCACACCAATTGATCCCGTTTTCATCATGTTGCCTATATTCAAGGAAGCTAGAATGAAGAAAGGGGATGATCTTGGGAGGTTCAGGCAATTGGATGAGATCTTGTTTGTTGATGGATATCCTGGATACATGCAGTTAATGTCTATTGTGGAGAACTGTATGCAAGTAGTTTCTGAAATCATAGAAGTTGGATCCTCAAAATTCTTCAGACTTGATGATTCAAAGGTTCTACGTTGGCTGTGCTATAAGGTTTGTCAGCTAAAACAGACACTACCCAAATTGGACAAAAACTATGCTGTTCAATCAGAGAAAGACACATTGATTGATGCAGTCTCTATATTAGGAGAGTATTTGAAGGAAGAGCCTTGGTTGCAGCTTTTGTGTAACCATCTTAAGTTAAATATACTTGAGGTTACTGGAAAAGCACAAGCAAATGCTGAAGGAAATAATAACTCACGTTTATGTAATGAATTACAGGAACAGAGTAATGATAAGAAGGGTACAACTGCAAAGAAAGGTAGACAAGCAAAGAAGCTGCAAGGTCTCAAGGAAGCTTATAAAAAGAGAGCACATCTGTTTTATTCAGTTCCGATGGCAGGGTTAAATTTTGAAGCCACACATACTGACAACCGTGATATTCTGAAGATATTTGCAGCTGAAGGTGTTGAGTTCCTTTTATCTTGTGAAGGGAAGGTACCCGTGTCAGAATGCAATGGGAAAATTATCTGCCTATTTTTCACTGCAAACTGGTGCAGACCTTGCAGAGCTTTCGTTCCCCGTCTTGTTGAACTTTATGAAACACTGAGAAAGAGGCGAATAAATCTAGAGATTATCTTCATCTCCTTTGACCGTGATGAGGATGGATTTAAAGAACACTTCAAGAATATGCCATGGCTAGCTGTTCCATTTGATTTAAATTTGCACAGAAGACTGATTGACAGATACCAAGTTGATCGAATCCCATCATTCGTTCCATCTTGTTCAGATGGCATAACCATTGAAGAAGACTTGATTGGATGCATTGAGGATTATGGTGCTGATGCATTTCCTTTCACAAGGAAGAGGCATGAGGAATTGAAAGGCATAGATATAAGGAAGCGCGAGGAAGCAGACTTGGAAGAATTATTGGGACACGAAGGAGGCAAATTTCTCATCTCTGGAGATGATAGAAAGGTGCCACTATCTGAACTAGCTGGTAAAACCATAGGCCTGTATTTTGGTGCCTATTGGTCTCCTCCTTGCTGCGCTTTCACTGTCCAACTTACAGATGCATACAACAATCTCAAGGCGGCAAAAGGCGACTGCTTTGAGATTGTTTTAATCTCAACAGATAGGGACCTTGAGGAATTCAATGTCAACAAAAGTACTATGCCATGGCTTGCTGTCCCATATGAGGACAGGACAAGGCATGACCTTCGAAGAATCTTCGATGTAAAGGGCATTCCTGCATTGGTTCTCATTGGACCAGATGGCAAAGTAATTAGTGTGAATGGAAAGTTAATGGTCTCCTCATATGGTGCAGAAGCTTTCCCATTCACCGAATCGCGGATAAGAGACCTTGAAGCAGCTCTGAGAAAGGAAGGAGAGGCTTTGCCTCCGCAGGTTGAGGATGTGAAGCATGAACATGTACTGAAATTGGATATGGCCAAAGCATATGTATGTGATTCCTGTAAAAAGCAAGGCAAATTCTGGACATTCTCTTGTGATGTCTGTGACTATGACCTTCATCCAAGTTGTCTAGAAAAGGTCAACAAGGACTAA 2175 0.4193 MARVCASLTFPPALRFKIQCHSHSSFVIFRVNSLYSQIYGYRGKEQSVTGSVRAFESSSAKPMSWCDGVLEPRVLVAPDPGTDRNGLGQMILLRHPKSGNATQYLFVNGILLELQWFKNLYGSWFLGDYITEDGRLYLSTPIDPVFIMLPIFKEARMKKGDDLGRFRQLDEILFVDGYPGYMQLMSIVENCMQVVSEIIEVGSSKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAVQSEKDTLIDAVSILGEYLKEEPWLQLLCNHLKLNILEVTGKAQANAEGNNNSRLCNELQEQSNDKKGTTAKKGRQAKKLQGLKEAYKKRAHLFYSVPMAGLNFEATHTDNRDILKIFAAEGVEFLLSCEGKVPVSECNGKIICLFFTANWCRPCRAFVPRLVELYETLRKRRINLEIIFISFDRDEDGFKEHFKNMPWLAVPFDLNLHRRLIDRYQVDRIPSFVPSCSDGITIEEDLIGCIEDYGADAFPFTRKRHEELKGIDIRKREEADLEELLGHEGGKFLISGDDRKVPLSELAGKTIGLYFGAYWSPPCCAFTVQLTDAYNNLKAAKGDCFEIVLISTDRDLEEFNVNKSTMPWLAVPYEDRTRHDLRRIFDVKGIPALVLIGPDGKVISVNGKLMVSSYGAEAFPFTESRIRDLEAALRKEGEALPPQVEDVKHEHVLKLDMAKAYVCDSCKKQGKFWTFSCDVCDYDLHPSCLEKVNKD 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00703 724 SUPERFAMILY Cysteine-rich domain 670 719 IPR046349 -
Gma04g00703 724 Pfam Thioredoxin-like 537 631 IPR012336 -
Gma04g00703 724 Pfam Thioredoxin-like 377 462 IPR012336 -
Gma04g00703 724 Pfam Ydr279p protein triple barrel domain 90 143 IPR041195 -
Gma04g00703 724 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 146 233 IPR019024 -
Gma04g00703 724 CDD RNase_H2-B 74 227 IPR040456 GO:0032299
Gma04g00703 724 PANTHER NUCLEOREDOXIN 3-RELATED 336 720 - -
Gma04g00703 724 Gene3D - 142 270 - -
Gma04g00703 724 ProSiteProfiles Thioredoxin domain profile. 351 515 IPR013766 -
Gma04g00703 724 PANTHER THIOREDOXIN 336 720 - -
Gma04g00703 724 Gene3D Glutaredoxin 356 493 - -
Gma04g00703 724 Gene3D Glutaredoxin 516 652 - -
Gma04g00703 724 Gene3D - 72 141 - -
Gma04g00703 724 SUPERFAMILY Thioredoxin-like 371 476 IPR036249 -
Gma04g00703 724 SUPERFAMILY Thioredoxin-like 522 633 IPR036249 -
Gma04g00703 724 CDD TryX_like_TryX_NRX 521 650 IPR045870 GO:0004791
Gma04g00703 724 ProSiteProfiles Thioredoxin domain profile. 519 660 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00703 Gma-Chr4 6562235 6572331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00703 K17609 - gmx:100791971 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00703 04 6562235 6572331 Gma04g00703 04 6562235 6572331 ECH