Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00661 ATGGTTTTTCCTTCTTCCTCCCTCTCCCTCCCCCTCTCGTTCTTCCCCATTCCCACTCTGCTACCTAATAACCTCATCTTCAGAAACAATAACTGGACAATCCTTAACCAACGCAAATGCCCATTGTCCGAGGAAAGACCACGCTTTTCATGTTGTGCTCTAAAACCCACTTCACAAAACAGGATTTTTAGAAGGGATTTGATGCTGTTGGGGCTTACTTCGCTCTCTCTACCAATGCCACTTTCAGTGACTCTTGCTGAAGAAGAACCGAAAATGGCTTCATTTCTTGATGAAATAAATGCCTATTCTTATATGTACCCTGTTGAGTTGCCTTCCGATAATTTTTCCTTCAAATGGATTGAATCCAGAAAGCCTGAACGATATTCATCAGCAGCACCACTTTCTCCTGATGCACGCCTGCGCATTGTGTCTGAGCGTGTTGACTTTATTGATAATGTTATCATTTCTGTCACGATAGGTCCACCAAATTCAAGCTATATAAAATCAAAGGATAAGAGTGAATGGACTGCAAAAGATGTTGCTGATTCAGTTTTAGCTGACAGATCTTCACTGCGAGTTACTTCAAGTCAGCGCTTAGAAGAGAGTTCAGTCCTTAATActcattctagtgaaATTGATGGTGAGATGTACTGGTATTATGAGTACCTTGTTCGTAAAGCACCTTTGAGACTTACTGATGAATCAAGCACTTACAGGCATTATCTTGCTTCAACAGCTGAAAGAGATGGTTATTTGTACTCTATCAGTGCTTCAACCGTCAGCCCTCGGTGGGAAAAACTCGGTCCTTTCCTTGATAAAGCGGTGAGTTCGTTTCGTCTTCTTAGTCCAACAGAAAATTATGTTCCTCCGTACAAAGATCCCTGGAGATTTTGGTGA 897 0.4125 MVFPSSSLSLPLSFFPIPTLLPNNLIFRNNNWTILNQRKCPLSEERPRFSCCALKPTSQNRIFRRDLMLLGLTSLSLPMPLSVTLAEEEPKMASFLDEINAYSYMYPVELPSDNFSFKWIESRKPERYSSAAPLSPDARLRIVSERVDFIDNVIISVTIGPPNSSYIKSKDKSEWTAKDVADSVLADRSSLRVTSSQRLEESSVLNTHSSEIDGEMYWYYEYLVRKAPLRLTDESSTYRHYLASTAERDGYLYSISASTVSPRWEKLGPFLDKAVSSFRLLSPTENYVPPYKDPWRFW 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00661 298 Pfam PsbP 94 279 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Gma04g00661 298 PANTHER - 27 298 - -
Gma04g00661 298 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 5, CHLOROPLASTIC 27 298 - -
Gma04g00661 298 SUPERFAMILY Mog1p/PsbP-like 94 280 IPR016123 -
Gma04g00661 298 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 80 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00661 Gma-Chr4 6114243 6119167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00661 - - gmx:100809891 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00661 04 6114243 6119167 Gma06g00654 06 5917856 5922764 GST