Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00649 ATGGAGAGTGAGAGTGAGATTATGATGATTCCATGTTTTGATTTTGGCAAGGCATTAGAAGAAGGGAGTGAGGAGTGGAAAGAAATGAGCAAGAAAGTGAGAGAAGCATGTGAGAGTCACGGTTGCTTCCTCTTGGTTTGTGATCATGAGATAATTCCCAAGGGTGTACATGAACAGTTTTTCAGTAACATGGAAGCATTGTTTGATTTGCCTGAAGAAACAAAGATGAAGCACATTAGTCCAAAGCCTTATAGCAGCTACAATGGGAAGAGCCCTGTCATTCCCCTCAGTGAAACCTTTGGAATCGATGATGTTCCACTCTCTGCTTCGGCTGAGGCCTTCACTTACCTCATGTGGCCTCAAGGAAACCCATCTTTCTGTGAGACACTAAAGATCATGAGCTTAAAGATGCTAGAATTAAGTTCCCTCGTTTTGAAAATGATAGTGGGGGGTTATGGCATTCAACAACATTACGTAGATGTTGAAAAGATGAAGAGCTCTAGCAATTCACGATTGATAAAGTACAAAGTTCCGGAAAATAATAATGACTCCAAGACTGCCCTGTTGCCTCACACTGACAAAAATGCCTTAACCATATTGTGCCAAAACGAAGTCCAAGGGCTCCAAGTATTATCCAAAACAGGCAATTGGATTGAATTGAAGATACCCCAAAATGGCTTTGTGGTCATTGTTGGTGATATACTAAAGGCGTGGAGCAATGGGAGGCTTCATGCAGCTACACACAGAGTGGTGATGAATGGAAACAAAGAGAGATATTCATTTGGCCTTTTTGCAATGCCAATGGAAGAGATGGACATTGAGGTGCCCCTTGAGTTGGTGGATGAGAAAATTCATCCCCTTCGTTATCATCCATTCAAATATGGAGAGTACACCTCTTACTTCGTTTCAAATCTCAAAGAAAATGCTCTTGAAGTGTTTGCAGGTCTTTGA 951 0.4164 MESESEIMMIPCFDFGKALEEGSEEWKEMSKKVREACESHGCFLLVCDHEIIPKGVHEQFFSNMEALFDLPEETKMKHISPKPYSSYNGKSPVIPLSETFGIDDVPLSASAEAFTYLMWPQGNPSFCETLKIMSLKMLELSSLVLKMIVGGYGIQQHYVDVEKMKSSSNSRLIKYKVPENNNDSKTALLPHTDKNALTILCQNEVQGLQVLSKTGNWIELKIPQNGFVVIVGDILKAWSNGRLHAATHRVVMNGNKERYSFGLFAMPMEEMDIEVPLELVDEKIHPLRYHPFKYGEYTSYFVSNLKENALEVFAGL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00649 316 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 167 267 IPR005123 -
Gma04g00649 316 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 4 315 - -
Gma04g00649 316 SUPERFAMILY Clavaminate synthase-like 5 304 - -
Gma04g00649 316 Gene3D - 8 314 IPR027443 -
Gma04g00649 316 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 89 IPR026992 -
Gma04g00649 316 Pfam 2OG-Fe(II) oxygenase superfamily 173 265 IPR044861 -
Gma04g00649 316 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00649 Gma-Chr4 5990282 5992494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00649 120 305 Glycosyltransferase AT5G59530 27.692 5.06e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00649 - - gmx:100817159 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00649 04 5990282 5992494 Gma06g00643 06 5820969 5821359 GST