Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00638 ATGACGGAGGTGTGGCAATTTTGGATCTGGGCTGGTGGCGCGACACAACAGAGTGGAAGTTGTAAGGAAAGGTTAACGCGTTCATTCAAAATACGGAACTTGAAACCCTCCCAATATAAACCCTCGCTTCGTTGTGTGCTCTCTCTTTCTTCTGCATCACTTTCCATTCTCTTCAACCTAACGCAGCATCGCTATACTCTTCATTCCATGGCTTTGCCCAATCAGCAAACCGTGGATTACCCTAGTTTCAAACTCGTTATCGTCGGTGATGGTGGCACAGGAAAGACAACCTTTGTGAAAAGGCATCTCACCGGAGAATTCGAGAAGAAATATGAGCCAACCATCGGTGTGGAGGTTCACCCATTGGATTTTTTCACAAACTGTGGAAAGATTCGATTCTACTGCTGGGATACTGCTGGACAGGAGAAGTTTGGTGGCCTCAGAGATGGATACTATATCCATGGGCAATGTGCTATTATAATGTTTGATGTTACTGCCCGGCTAACATACAAAAATGTTCCCACCTGGCACCGTGATCTTTGCAGGGTCTGTGAAAACATCCCAATTGTTCTTTGCGGTAACAAGGTTGATGTCAAGAACAGGCAAGTGAAAGCAAAGCAGGTTACTTTCCACAGGAAGAAGAATTTGCAGTACTATGAGATTTCAGCTAAGAGCAACTACAATTTCGAGAAGCCTTTCCTCTATTTGGCCAGGAAACTTGCAGGTGATCCTAATTTGCACTTTGTGGAATCTCCTGCATTGGCTCCACCAGAAGTTCAAATTGATTTAGCTGCACAGCAACAGCACGAGGCTGAGCTTCTTGCAGCTGCTAGTCAGCCCCTCCCTGACGATGATGATGAATCTTTTGAGTAG 873 0.4536 MTEVWQFWIWAGGATQQSGSCKERLTRSFKIRNLKPSQYKPSLRCVLSLSSASLSILFNLTQHRYTLHSMALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAAQQQHEAELLAAASQPLPDDDDESFE 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00638 290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 263 IPR027417 -
Gma04g00638 290 SMART rho_sub_3 85 239 IPR001806 GO:0003924|GO:0005525
Gma04g00638 290 CDD Ran 83 248 - -
Gma04g00638 290 SMART ran_sub_2 88 289 - -
Gma04g00638 290 PANTHER RAN GTPASE 47 290 IPR002041 GO:0003924|GO:0005525|GO:0006913
Gma04g00638 290 Pfam Ras family 84 240 IPR001806 GO:0003924|GO:0005525
Gma04g00638 290 ProSiteProfiles small GTPase Ran family profile. 76 240 IPR002041 GO:0003924|GO:0005525|GO:0006913
Gma04g00638 290 ProSiteProfiles small GTPase Rab1 family profile. 77 290 - -
Gma04g00638 290 SMART ras_sub_4 80 243 - -
Gma04g00638 290 Gene3D - 71 288 IPR027417 -
Gma04g00638 290 PANTHER GTP-BINDING NUCLEAR PROTEIN 47 290 - -
Gma04g00638 290 ProSiteProfiles small GTPase Ras family profile. 74 274 IPR001806 GO:0003924|GO:0005525
Gma04g00638 290 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 96 110 IPR002041 GO:0003924|GO:0005525|GO:0006913
Gma04g00638 290 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 143 161 IPR002041 GO:0003924|GO:0005525|GO:0006913
Gma04g00638 290 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 163 184 IPR002041 GO:0003924|GO:0005525|GO:0006913
Gma04g00638 290 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 199 217 IPR002041 GO:0003924|GO:0005525|GO:0006913
Gma04g00638 290 PRINTS GTP-binding nuclear protein Ran/Tc4 family signature 237 259 IPR002041 GO:0003924|GO:0005525|GO:0006913
Gma04g00638 290 TIGRFAM small_GTP: small GTP-binding protein domain 83 233 IPR005225 GO:0005525
Gma04g00638 290 SMART rab_sub_5 83 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00638 Gma-Chr4 5860775 5864181 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00638 K07936 - gmx:100814146 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00638 04 5860775 5864181 Gma04g00638 04 5860775 5864181 ECH
Gma04g00638 04 5860775 5864181 Gma06g00626 06 5657699 5665266 GST