Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00620 ATGATGGATCCAAGCAACCTTTTGCCAGCTGATGGACTTGAAGAAGTCCACCAAAATGGTGTTCATGACGAACTGTCTAATTCTGGAAAGGATGATATTGCCTCCAATGTAGACCCTGGTGTTACCAAAATTATAGAAACTGCCGCTACAAATGGAAATTTTGAAAATTTCATCCAGTATGATAGCACTGCAACTGATTACTCGTCCAAGGAAGGATCAAACGATAACATAGATGTTAACAATGTCACCATTTCCAAGGAAGAGGAAGCAAAAATCATAGATCGGACAGGGCAATTAAAAGTAGGCAAAGGTCCTGCCAAGAATAAGAATGCAAAGCCACCAAGCCCCAGAGGCAGTCATGTAAGTTCAGTTAAAAAGAACAAAGATGGAAAAGATGAAGAGGTAGCATCTGCTGTTTCAAATGGTACTTTTGCTTTAGACTCTCACCCAAGACAGCCAATTAAAAACAGATCATTGAGTGACAAGCAGGCTCGATTGTCCAAGCACCCTGGAAAGTCTAATGCAGCAACTTCTGAAGAATCAATGGAGAAGTCTAGACCACGATTATTGAAGAAAGAGCCCCTTGATAATCTTCAAGGAGAAACAGAATCTTCTTCTCCTACCGCAGAAGATGCCAAACCTCGCAGGGTGGGAGCACTTCCAAAATATGGATTCAGTTTCAAGTGTGATGAGCGAGCTGAGAGAAGAAAAGAGTTCTACACTAAGCTTGAGGAAAAGATTCATGCTAAGGAAGTGGAGGAGAGTAACCTGCAAGCAAAAACCAAGGAGACCCAAGAAGCTGAGATTAAGATGCTTCGAAAAAGTCTAGGATTTAAAGCAACTCCAATGCCAAGCTTCTACCAGGAGCCTCCTCCTCCTAGGGTGGAGTTAAAAAAGATGCCAACTACAAGAGCTAAATCTCCCAAGCTTGGTCGCAAGAAGAGTTCAACGAATTCAGAGCCAGAAGGAAACCTTAGCAACAATGCTCGACAAGGTCGTTTAAGTCTGGATGAGAAAGTGTCTCAGACTAACCCCACTAAAGGAATTAGTCCTGTTCATCAAAAGAAGCCACAACGAAAGTCTCTTCCTCCGCAACTGACTTCTGAAAAGACCAGGTCATCCAATTCTGCGTCTGTGAGGACCTCATCTAAGGCAGTGAATGGTGGTAAAAACTCCTTATCAAGTGTAACAACTGAAGTTACCACCTTATCCAATCCAAGAGAGGAAGAGAAAGTTGAAATAGCTGCAGCCACTGAAGAGAACAATGTCTTATTGAATGAGACAAGTAAAGCTCTTCCTCTGAATATAGAGCCAGATGAAACAGAATCTCCTGTGAATGGTGATTTAGTCATTCAAGAGAAACCACAGCTCAACATGGCGCAAGAACCCATAGCAGCGGAGCACTAA 1407 0.4257 MMDPSNLLPADGLEEVHQNGVHDELSNSGKDDIASNVDPGVTKIIETAATNGNFENFIQYDSTATDYSSKEGSNDNIDVNNVTISKEEEAKIIDRTGQLKVGKGPAKNKNAKPPSPRGSHVSSVKKNKDGKDEEVASAVSNGTFALDSHPRQPIKNRSLSDKQARLSKHPGKSNAATSEESMEKSRPRLLKKEPLDNLQGETESSSPTAEDAKPRRVGALPKYGFSFKCDERAERRKEFYTKLEEKIHAKEVEESNLQAKTKETQEAEIKMLRKSLGFKATPMPSFYQEPPPPRVELKKMPTTRAKSPKLGRKKSSTNSEPEGNLSNNARQGRLSLDEKVSQTNPTKGISPVHQKKPQRKSLPPQLTSEKTRSSNSASVRTSSKAVNGGKNSLSSVTTEVTTLSNPREEEKVEIAAATEENNVLLNETSKALPLNIEPDETESPVNGDLVIQEKPQLNMAQEPIAAEH 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00620 468 Coils Coil 240 270 - -
Gma04g00620 468 Coils Coil 407 427 - -
Gma04g00620 468 MobiDBLite consensus disorder prediction 94 218 - -
Gma04g00620 468 MobiDBLite consensus disorder prediction 179 198 - -
Gma04g00620 468 MobiDBLite consensus disorder prediction 312 351 - -
Gma04g00620 468 PANTHER PROTEIN WVD2-LIKE 4 2 458 IPR044833 GO:0008017
Gma04g00620 468 PANTHER PROTEIN WVD2-LIKE 5-RELATED 2 458 - -
Gma04g00620 468 MobiDBLite consensus disorder prediction 154 168 - -
Gma04g00620 468 MobiDBLite consensus disorder prediction 360 403 - -
Gma04g00620 468 MobiDBLite consensus disorder prediction 273 409 - -
Gma04g00620 468 Pfam Targeting protein for Xklp2 (TPX2) domain 225 296 IPR027329 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00620 Gma-Chr4 5667790 5673561 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00620 - - gsj:114408962 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00620 04 5667790 5673561 Gma04g00620 04 5667790 5673561 ECH
Gma04g00620 04 5667790 5673561 Gma06g00605 06 5481186 5487953 GST
Gma17g02010 17 36043847 36049878 Gma04g00620 04 5667790 5673561 PCT
Gma14g01097 14 14743236 14747182 Gma04g00620 04 5667790 5673561 PCT
Gma04g00620 04 5667790 5673561 Gma17g02010 17 36043847 36049878 PCT
Gma04g00620 04 5667790 5673561 Gma14g01097 14 14743236 14747182 PCT