Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00578 ATGTCGATTTTACCGAAAGGCGATTCGGTTCAAATCAGGGAGGTTTGGAACGATAACCTCGAGGAGGAGTTCGCGTTGATCCGCGAAATCGTCGACGAGTATAACTACGTGGCGATGGATACCGAGTTCCCTGGCGTGGTTCTCCGTCCGGTGGGGAATTTCAAGAACATCAACGACTACAACTACCAAACCTTGAAGGACAACGTGGACATGTTGAAGCTGATCCAATTAGGTCTCACCTTCTCCGACGAAAACGGGAACCTTCCCACCTGCGGCACGGAGAGCCCCTGCATCTGGCAATTCAACTTCCGCGAGTTCAACGTCAGCGAAGACATCTTCGCGAGCGACTCGATCGAGCTGTTGCGCCAGTGCGGAATCGACTTCAAGAAGAACAGCGAGAATGGAATCGACGTGAACCGGTTCGGGGAGCTCCTCATGTCCTCCGGGATCGTGTTGAACGACTCCGTGCGCTGGGTTACCTTCCACAGCGGCTACGATTTCGGCTACCTCCTGAAGCTGTTGACATGCCGGAGCTTGCCGGACACGCAGGCCGGGTTCTTCGATCTGATCAAGATGTATTTTCCGATGGTATATGATATCAAGCACCTGATGAAGTTCTGCAACAGCCTCCATGGAGGGTTGAACAAGCTCGCGGAGTTGTTGGAGGTGGAGAGGGTTGGCGTCTGCCATCAGGCTGGGTCTGATAGTTTACTCACTTCTTGTACATTTAGAAAGTTGAGGGATACGTTCTTCAGTGGCTCCACGGAGAAATATGCTGGTGTCTTGTATGGTTTAGGGGTTGAGAGTGGACAGACTAATTGA 822 0.5207 MSILPKGDSVQIREVWNDNLEEEFALIREIVDEYNYVAMDTEFPGVVLRPVGNFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTESPCIWQFNFREFNVSEDIFASDSIELLRQCGIDFKKNSENGIDVNRFGELLMSSGIVLNDSVRWVTFHSGYDFGYLLKLLTCRSLPDTQAGFFDLIKMYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTSCTFRKLRDTFFSGSTEKYAGVLYGLGVESGQTN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00578 273 Pfam CAF1 family ribonuclease 15 136 IPR006941 -
Gma04g00578 273 SUPERFAMILY Ribonuclease H-like 12 265 IPR012337 -
Gma04g00578 273 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED 1 272 - -
Gma04g00578 273 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 272 IPR039637 GO:0004535|GO:0030014
Gma04g00578 273 Gene3D - 2 268 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00578 Gma-Chr4 5219497 5220318 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00578 K12581 - gmx:100785970 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00578 04 5219497 5220318 Gma06g00563 06 5024757 5027023 GST