LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma04g00556	ATGAGTGTCCAAAGCCAGAGTGGTTCAAGCAATGGCACCGAACGATCAAGGACGCATTGGACTCCATTGCTGGAACGCTATTTCATTGATCTCATGTTGGAGCATTTGCAGAGAGGGAACAGGGTTGGCCACACTTTCAACAAGCAAGCATGGACAGACATGCTCACCTCGTTCAATGATAACTTTGGTTCTCAGTACGACAAAGATGTCTTGAAAACTCGCTACACCAATTTGTGGAAGCAGTTCAATGATGTCAAGAGCCTTCTTTCTCACTTTGGTTTTTCCTGGGATGCTGCCCGGCAAATGGTTGTGGCTGCTGATGATGATTCTGTTTGGGATGCTTATTTGAAAGCTCACCCTGATGCTAGATGCTACAGAACAAAACCAGTGCTCAATTTTGATGATTTGTGTGTTATATATGGCCACACTGTTGCTGATGGAAGATATAGTTTATCTAGCCATGATGTAAACCTTGATGATCAAGTACAAGGACAACATTTGGGTGATGGAATGGGAAGCATTGCTGTACCGAGTAGTGAACGTGCCAAGACAGATTGGACTGCTTCTATGGACCAGTTTTTTATAGAGCTTTTGCTGGATCAGTTAGGAAGGGGAAATCAAGTGGATAATGGATTCAATAAAAATGCTTGGACAGATATGCTAGCCCTCTTTAATGCTAAGTTTGGATGTCAACATGGTAGAAGGGTTTTAAAGAATCGGTTCAAGAAACTGTTGAAATATTACCGTGATATAACAAATCTTATAAAACAAGGCTTTTCGTGGGATGAACAACAACAAATGCTTTTGGCTGATGATGATGTCTGGAATGCTTATGTCAAGGCACATCCGCACGCACGAACATATAGATCAAAAACTTTGCCAAACTATCGTGATTTAGAATTAATATTCAGAAATGTGGCTGAAAATGAGATCAGTAATTTGCAGCAGGAGAAAAATCATGAAGATGTCATATCAGAAACAAAGGCTGGTGAAACAAAAGGAAGTCGCAACCCAAGTGGCACTGATCGTACTAGAACATATTGGACACCCCCAATGGACCGATGCCTCATTGACTTGTTATTGGAGCAGGTCAAACATGGAAATAGACTTGGGCAGACATTCATTGCCCAAGCTTGGAATGACATGATTACAACTTTCAATGAACGATTCAAATCTCAATACGACAAAGATGTTCTGAAGAATCGTTACAAACATTTCAGGAAACAGTTCAATGATGTAGACCATCTTCTTCAACAGGGTGGGTTCTCATGGGATGATACAAGAGAAATGATTGATGCAGAAGATCATGTTTGGGATGCTTATACAAAGGCACACCCTGAAGCTCGATCACTTAGAGTTAAAACCTTGCCAGACTATTGGAAATTGTGTGTTATATTTGGAGCGGAAAGTGAACAGAAGAATGGCTTTTTTCCAAATGTTTATGATGCTGGTTCTACAATAGAGTGGACAGAATCAATGGAACACTATATTGTTGACCTTATGATTGAGCAAGTAAATAGAGGAAATAGGATTGGCCATTTATTCAATGAGCAAGCTTGGATGCACATGGTCCAAGCGTTTAACGCTAGATGGGGACTCCAATCTGATAAGCAGGTTCTAATGGATCAATATTTCTGCTTGATGAAAAAACATGATGACATCAGCAATATTCTCAGTCACAGTGAATTTACATGGAATGAAACCCTACAAACGTTAAATGCTGAGGATGATGTCTGGGATGCATACATTAAGGACCACCCAGATGCCATCTCATATAAAAACAAATGTTTGTATCTTTTCCATGATTTATGCAAGATTTTTGGAAACAAATTAATGGAAGTATCAGATGTAAGAGTGAGTGATCTGGAGCAGCTTCAATTGATGGAAGCAAATGATTTTACCATTGAAATGGATATGGATGAAACAAATGAAAGTTTGCTTAATGTTAGCAGTGTTGGTATATCAGACCAGGATCCGGGCAGGGCAAAGGAAATAGATGCGGATGGATCATTTGGGAATTTGGTTGTGAGTAGCAGCAATGAAATTGAGATTGTTGCCGTTGGAACATCAGGAAATTTAGATGTGGATATGGATATGACATCTGGAACCTGTGGGAATTTGGATGTGACTGGCGACACTCAAATATTATCTCAAGATAAACAAGGCCCTGACGAAATGGCTACAAATGGAACACGTGGGGATTTGGAATTGAGTGGCAACACTAAAATAACACAGCATGTCAGAAAAAGGCCTAATATGATGTTTCAAGACTCCAGACCTCCCAAAAAGAAGCTGGGAATGAAAGAAGCTTTGTCTGAGATGGCTAGTGCTGTTAAGGCACTGATGAATGATAAAGAGAACAACAATACATCATTTGACGATGCTTTAAGTGCACTTCGAGCTATGCCGGACGTAGATGATGACTTAGTAATGGATGCGTGTGATCTGTTGGAAGATGAGAGAAAGGCTAAGATATTTTTAGCTTTGGATATCTCTTTGCGAAAGAAGTGGTTGCTTAGAAAGCTTCGTCAGGGAAAGCCCACATGA	2547	0.4016	MSVQSQSGSSNGTERSRTHWTPLLERYFIDLMLEHLQRGNRVGHTFNKQAWTDMLTSFNDNFGSQYDKDVLKTRYTNLWKQFNDVKSLLSHFGFSWDAARQMVVAADDDSVWDAYLKAHPDARCYRTKPVLNFDDLCVIYGHTVADGRYSLSSHDVNLDDQVQGQHLGDGMGSIAVPSSERAKTDWTASMDQFFIELLLDQLGRGNQVDNGFNKNAWTDMLALFNAKFGCQHGRRVLKNRFKKLLKYYRDITNLIKQGFSWDEQQQMLLADDDVWNAYVKAHPHARTYRSKTLPNYRDLELIFRNVAENEISNLQQEKNHEDVISETKAGETKGSRNPSGTDRTRTYWTPPMDRCLIDLLLEQVKHGNRLGQTFIAQAWNDMITTFNERFKSQYDKDVLKNRYKHFRKQFNDVDHLLQQGGFSWDDTREMIDAEDHVWDAYTKAHPEARSLRVKTLPDYWKLCVIFGAESEQKNGFFPNVYDAGSTIEWTESMEHYIVDLMIEQVNRGNRIGHLFNEQAWMHMVQAFNARWGLQSDKQVLMDQYFCLMKKHDDISNILSHSEFTWNETLQTLNAEDDVWDAYIKDHPDAISYKNKCLYLFHDLCKIFGNKLMEVSDVRVSDLEQLQLMEANDFTIEMDMDETNESLLNVSSVGISDQDPGRAKEIDADGSFGNLVVSSSNEIEIVAVGTSGNLDVDMDMTSGTCGNLDVTGDTQILSQDKQGPDEMATNGTRGDLELSGNTKITQHVRKRPNMMFQDSRPPKKKLGMKEALSEMASAVKALMNDKENNNTSFDDALSALRAMPDVDDDLVMDACDLLEDERKAKIFLALDISLRKKWLLRKLRQGKPT	848

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma04g00556	848	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	324	475	-	-
	Gma04g00556	848	MobiDBLite	consensus disorder prediction	717	736	-	-
	Gma04g00556	848	MobiDBLite	consensus disorder prediction	314	345	-	-
	Gma04g00556	848	PANTHER	EXPRESSED PROTEIN	174	304	-	-
	Gma04g00556	848	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	174	304	-	-
	Gma04g00556	848	Pfam	Myb/SANT-like DNA-binding domain	347	441	IPR024752	-
	Gma04g00556	848	Pfam	Myb/SANT-like DNA-binding domain	488	582	IPR024752	-
	Gma04g00556	848	Pfam	Myb/SANT-like DNA-binding domain	186	278	IPR024752	-
	Gma04g00556	848	Pfam	Myb/SANT-like DNA-binding domain	19	115	IPR024752	-
	Gma04g00556	848	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	485	610	-	-
	Gma04g00556	848	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	9	168	-	-
	Gma04g00556	848	PANTHER	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	725	844	-	-
	Gma04g00556	848	MobiDBLite	consensus disorder prediction	314	329	-	-
	Gma04g00556	848	PANTHER	EXPRESSED PROTEIN	324	475	-	-
	Gma04g00556	848	PANTHER	EXPRESSED PROTEIN	485	610	-	-
	Gma04g00556	848	PANTHER	EXPRESSED PROTEIN	725	844	-	-
	Gma04g00556	848	MobiDBLite	consensus disorder prediction	330	345	-	-
	Gma04g00556	848	PANTHER	EXPRESSED PROTEIN	9	168	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma04g00556	Gma-Chr4	5002045	5007053	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma04g00556	-		-	gmx:100813264	1710.66

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma04g00556	04	5002045	5007053	Gma04g00556	04	5002045	5007053	ECH
	Gma04g00556	04	5002045	5007053	Gma06g00545	06	4818489	4824012	GST