Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00555 ATGGAGCTGACACCCCAGCAGCTGAGCCAATACAACGGCACGGACCCATCGAAGCCGATCTACGTGGCGGTGAAGGGCCGCGTCTACGACGTCACCACCGGAAAATCCTTTTACGGCCCCGGCGGCCCCTACGCCATGTTCGCCGGCAAAGACGCCAGCAGAGCCCTGGCGAAGATGAGCAAGAACGACGACGACATCTCCCCCTCCCTCGACGGCCTCTCCGACAAGGAGATCGGCGTTCTCAACGACTGGGAGAACAAATTCCAAGCTAAGTACCCTGTCGTTGCTCGTGTTCTCAATTAA 303 0.5908 MELTPQQLSQYNGTDPSKPIYVAVKGRVYDVTTGKSFYGPGGPYAMFAGKDASRALAKMSKNDDDISPSLDGLSDKEIGVLNDWENKFQAKYPVVARVLN 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00555 100 PANTHER CALCUTTA CUP-RELATED 2 99 - -
Gma04g00555 100 Gene3D - 1 99 IPR036400 -
Gma04g00555 100 Pfam Cytochrome b5-like Heme/Steroid binding domain 4 76 IPR001199 -
Gma04g00555 100 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 2 99 IPR036400 -
Gma04g00555 100 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 2 99 - -
Gma04g00555 100 SMART Cyt_b5_2 3 99 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00555 Gma-Chr4 4997712 4998319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00555 K17278 - gmx:100813061 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00555 04 4997712 4998319 Gma04g00555 04 4997712 4998319 ECH
Gma04g00555 04 4997712 4998319 Gma06g00544 06 4812196 4812871 GST