Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00554 ATGAGTAGGTGTGTATCTTGTGCGCTGATTCCCAATAAGAATTTCTTGGTATCACCAATTCAAATCCCAATTCATAATGCAGTAAAGGTTAGGGGCAACAATAGAACTTGTGGCCTGCGCGTTCAGCTTTCTATGGTGGACTCTTCCTCCGCTGATTTCACCAGACGCATCGAACGAGCTTGGTTAATTTCTAAGCAACCAGGGCCAATCGTGTGTTCATCTTGCGACTCAAAAGGGCATATTGAATGTAAATGGTGTGCGGGTACTGGTTTTTTTATTCTTGGTGATAACATGCTTTGTGAAGTCCCATCAAGAAACACTACCTGCATTATTTGCACTGGAAAGGGATCAATGTGCTGTTCTGATTGTCAAGGAACAGGCTTTCGTGCAAAGTGGTTGGGAGAACCTCCTTCTTCCTAG 420 0.4381 MSRCVSCALIPNKNFLVSPIQIPIHNAVKVRGNNRTCGLRVQLSMVDSSSADFTRRIERAWLISKQPGPIVCSSCDSKGHIECKWCAGTGFFILGDNMLCEVPSRNTTCIICTGKGSMCCSDCQGTGFRAKWLGEPPSS 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00554 139 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 29 138 - -
Gma04g00554 139 PANTHER OS09G0423700 PROTEIN 29 138 - -
Gma04g00554 139 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 70 129 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00554 Gma-Chr4 4986775 4988801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00554 - - gmx:100810900 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00554 04 4986775 4988801 Gma04g00554 04 4986775 4988801 ECH
Gma04g00554 04 4986775 4988801 Gma06g00543 06 4809909 4812071 GST