Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00552 ATGAAGATAGCGGTGGAAGGGTGCATGCACGGGGACCTGGACAATGTCTACAGAACCCTTCAACAGTTGGAGAAATCTGAAAACACGAAAATCGACCTTCTCCTCTGCTGCGGCGATTTCCAAGCCGTGAGGAACGAGCATGACTTGAAGAGCCTGAACGTCCCTCTCAAATACCGCTCCATGAACTCCTTCTGGAAGTACTATTCCGGCGCCGAGGTTGCCCCCTACCCCACCATCTTCATCGGCGGCAACCACGAAGCTTCCAATTATCTCTGGGAACTGTACTATGGAGGATGGGCTGCTCCTAATATCTACTTCTTGGGAGCTGCTGGGGTGGTGAGGTTTGGGAATGTTCGAATTGGTGGCCTCTCTGGGATCTATAAATCTTTCGACTATAAATTAGGACACTTTGAGAGGCCTCCCTATGATCATAATACCATTAAGTCCGTGTATCATGTTCGTGAATATGATGTTCGCAAATTGATGCAAGTCAAGGAGCCAATTGATGTTTTTCTTTCGCATGATTGGCCAGTGAGAATCACTGATTATGGGGATTGGAGGGAGCTTGTTCGGCGCAAGCATTATTTTAAGCAAGAGATAGAGGAAAAAAGACTAGGTAGTAAACCTGCTGCTGAACTTCTAGAAAAATTGAAACCACATTATTGGTTTTCAGCTCACTTACACTGCAAGTTTGCTGCTCTTGTTCAACATGGGGAAGGAGGTCCACTGACAAAATTTCTTGCACTGGATAAATGTATTCCTGGGCGTGATTTCTTACAGATTGTGGAAATTGAATCAGATGCAGGACCTTATGAGATTCAGTATGATGAAGAATGGTTAGCAATAACACGGAAGTTCAACCCTATATTCCCTTTGACTTACAAAGGTGCAGACTTCAGAGGCATAAATCTTGAGATGGAAGATTGTCTTGAATGGGTTAGAAGCAAGCTACAAGAGAGGGGGTGCAAACCTTTTGAATTTGTTAGAACAGCTCCTTGTTATGACCCTTCACGATCCAATTTTGATGGTGCTTTTGCTGTGAATCCCCGAAATCCTCAGACAGAATCTTTTGTGCGGCTTCTGGAACTTCCATATCTTTTTGATAGGAATCCTGAAGCAAAGGATTTGTCACCTTATCCTTCTCCTTCAATTCAGAGAGGCACGGCTTATGATAGCGAGGACATTCCCATTGATGATGTGGCTGATGATGATGATGATGATGAAGAGCTCCCAAAAGTTGATAACGTTGAAACTGAGACTTCCAATTTGTGA 1272 0.441 MKIAVEGCMHGDLDNVYRTLQQLEKSENTKIDLLLCCGDFQAVRNEHDLKSLNVPLKYRSMNSFWKYYSGAEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGAAGVVRFGNVRIGGLSGIYKSFDYKLGHFERPPYDHNTIKSVYHVREYDVRKLMQVKEPIDVFLSHDWPVRITDYGDWRELVRRKHYFKQEIEEKRLGSKPAAELLEKLKPHYWFSAHLHCKFAALVQHGEGGPLTKFLALDKCIPGRDFLQIVEIESDAGPYEIQYDEEWLAITRKFNPIFPLTYKGADFRGINLEMEDCLEWVRSKLQERGCKPFEFVRTAPCYDPSRSNFDGAFAVNPRNPQTESFVRLLELPYLFDRNPEAKDLSPYPSPSIQRGTAYDSEDIPIDDVADDDDDDEELPKVDNVETETSNL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00552 423 MobiDBLite consensus disorder prediction 395 413 - -
Gma04g00552 423 Gene3D - 7 244 IPR029052 -
Gma04g00552 423 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
Gma04g00552 423 Pfam Lariat debranching enzyme, C-terminal domain 244 364 IPR007708 GO:0006397|GO:0016788
Gma04g00552 423 CDD MPP_Dbr1_N 3 259 IPR041816 -
Gma04g00552 423 MobiDBLite consensus disorder prediction 372 423 - -
Gma04g00552 423 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 412 - -
Gma04g00552 423 SUPERFAMILY Metallo-dependent phosphatases 1 253 IPR029052 -
Gma04g00552 423 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00552 Gma-Chr4 4976498 4980449 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00552 K18328 - gmx:100812726 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00552 04 4976498 4980449 Gma06g00541 06 4802711 4805185 GST