Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00514 ATGCTAGCTTACCTGGAACACTTCGTTCACGAAAACGACGCCGAATCGAGGCAAGACGACGACGTAGCGACCCTCTCCAAAGCGCTTGAGcTTCAAGCCAGCGTCGAGGAATTCGGTCCCACCGGAGTCGCCGGCAAGGATTTCGGCGGAATCAAGTCCGTCAAACCCTTGGCCCTGATCAGGCCCTCTGCCGCCGCCGACGTCGCCAGAGTGGTGAAGCACGCGGCGGCGTCTTCTAGCCTCACGGTGGCGGCGCGCGGGAACGGCCACTCCATCAACGGCCAGGCCATGGCGGAGCAGGGCCTGGTCCTCGACATGCGCGCCATCCAGGACCCGTTTGAGATTCTCTGGATAGAAGGTTCTCCCTACGTCGACGTTTCGGGAGGGGCATTATGGGAAGACGTCCTTAAACGCTGCGTTTCGGAGTTTGGCCTCGCCCCGAGGTCGTGGACGGATTATCTCAGCTTAACGGTGGGCGGAACGCTCTCCTACGCCGGCGTCAGCGGTCAAACATTCCGTTACGGTCCTCAGACATCGAACGTAACGGAATTGGAAGTTGTAACTGGGAAAGGAGACACACTGTGCTGCTCCCAAACAGAAAACTCTGAACTTTTTTTTGGCGCGCTTGGTGGCTTAGGACAGTTCGGTATCATTACCAGAGCCAGGGTCGTTCTTCAAGAAGCTCCAGATATGGTGAGGTGGATAAGAGTGGTATACTCTGAGTTTGAGGAGTATGCTAGGGATGCAGAGTCGCTGGTGGAGGAATATTGTTTTGATTACGTGGAAGGGTTCGTTCTGGTGAACAGTGATAACCGGGCCAATGGATGGCCCACAGTTCCATTGGGCCCGGAACAAGTGTTCGACCCGACTCATATCCCTTTCACTGCTGGTCCTGTCTTGTATTGCTTGGAGCTCGCTCTTCACTATCGTAACGCGGATCATCCTTCTCGTGTCGATACGGATGTGGATGGATTGCTTGGACGGCTACGATTCATTCAGGGTCTGAAGTTCCAGGTGGACGTGACATACATGGAGTTCTTGCTGCGTGTAAAGCGTGTGGAGGAGCACGCGAAAGGCAACGGAACCTGGGATGCACCTCACCCTTGGCTCAATCTGTTCGTGTCCAAGTCCCACATCGTTGATTTTGATCGTGAGGTGTTCAAGAAGATTCTCAAGGACGGAGTCGATGGACCCATTTTAGTCTACCCTCTCTTGCGAAACAAGTGGGATAGTCGTCATTCAGTGGTGGTGCCGGACAGTGACATGTTCTACATAGTAGCCTTGCTCCGATTCACTCCACCACCCCCAAAGGGCCCAGCAGCTGAACTCTTGGTGGCGCAAAATAATGAGATTATTGAGTTCTGCACAAGCAGAAGCCTTGATTTCAAGCTATACTTTCCTCACTACCAGTCACGGGAGGATTGGATCAAGCACTTTGGGAATCAATGGGCCAGATTTGCGGAGCGAAAGGCCAATTTTGATCCCATGGCTATCCTTGCACCAGGACAGAAAATTTTCTCCAGAACCTCTCAACCTCAACCTCCTTCTATCACATAA 1557 0.5331 MLAYLEHFVHENDAESRQDDDVATLSKALELQASVEEFGPTGVAGKDFGGIKSVKPLALIRPSAAADVARVVKHAAASSSLTVAARGNGHSINGQAMAEQGLVLDMRAIQDPFEILWIEGSPYVDVSGGALWEDVLKRCVSEFGLAPRSWTDYLSLTVGGTLSYAGVSGQTFRYGPQTSNVTELEVVTGKGDTLCCSQTENSELFFGALGGLGQFGIITRARVVLQEAPDMVRWIRVVYSEFEEYARDAESLVEEYCFDYVEGFVLVNSDNRANGWPTVPLGPEQVFDPTHIPFTAGPVLYCLELALHYRNADHPSRVDTDVDGLLGRLRFIQGLKFQVDVTYMEFLLRVKRVEEHAKGNGTWDAPHPWLNLFVSKSHIVDFDREVFKKILKDGVDGPILVYPLLRNKWDSRHSVVVPDSDMFYIVALLRFTPPPPKGPAAELLVAQNNEIIEFCTSRSLDFKLYFPHYQSREDWIKHFGNQWARFAERKANFDPMAILAPGQKIFSRTSQPQPPSIT 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00514 518 Pfam FAD binding domain 56 196 IPR006094 GO:0050660
Gma04g00514 518 Gene3D - 232 465 IPR016170 -
Gma04g00514 518 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 229 506 IPR015345 GO:0009690|GO:0019139|GO:0050660
Gma04g00514 518 PANTHER GULONOLACTONE OXIDASE 11 512 - -
Gma04g00514 518 ProSiteProfiles PCMH-type FAD-binding domain profile. 52 228 IPR016166 GO:0071949
Gma04g00514 518 SUPERFAMILY FAD-binding/transporter-associated domain-like 45 226 IPR036318 GO:0050660
Gma04g00514 518 Gene3D - 106 230 IPR016169 -
Gma04g00514 518 SUPERFAMILY FAD-linked oxidases, C-terminal domain 229 506 IPR016164 GO:0003824|GO:0050660
Gma04g00514 518 Gene3D - 44 507 IPR016167 -
Gma04g00514 518 PANTHER CYTOKININ DEHYDROGENASE 7 11 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00514 Gma-Chr4 4566530 4569941 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00514 K00279 - gmx:100795849 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00514 04 4566530 4569941 Gma04g00514 04 4566530 4569941 ECH