Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00502 ATGGATATCAGGTTGATGGATTTGGACTCTCCATTGTTCAACACTCTGCACCGAATCATGGATCTGACAGAGGACGCAGAGAAGAACTTGAACGCTCCGACGCGGACATACGTGCGCGACGCGAAGGCAATGGCTGCGACTCCTGCGGACGTGAAGGAGTACCCTAACTACTACGTGTTCGTGATCGACATGCCAGGCCTGAAATCCGGGGACATTAAGGTGCAGGTGGAGGATGATAACGTGCTTCTGATAAGCGGCGAGAGGAAGAGGGAGGAGGATAAAGAGAAAGAAGGGGCTAAGTATTTGAGGATGGAGAGAAGGGTTGGCAAGTTCATGAGGAAGTTCACGCTTCCCGAGAATGCCAACACCGATGCTATCTCTGCCGTCTGCCAAGACGGTGTGCTCACTGTCACTGTCAACAAGCTGCCTCCTCCTCAGCCCAAAAAGCCCAAGACCATAGAGGGTACTGGTAACGTTTTCCTTACGATTTTAATGAATGAAAACGCGCACGACATAGAGGTGTAG 525 0.5124 MDIRLMDLDSPLFNTLHRIMDLTEDAEKNLNAPTRTYVRDAKAMAATPADVKEYPNYYVFVIDMPGLKSGDIKVQVEDDNVLLISGERKREEDKEKEGAKYLRMERRVGKFMRKFTLPENANTDAISAVCQDGVLTVTVNKLPPPQPKKPKTIEGTGNVFLTILMNENAHDIEV 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00502 174 Pfam Hsp20/alpha crystallin family 50 154 IPR002068 -
Gma04g00502 174 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 40 156 IPR002068 -
Gma04g00502 174 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 7 154 - -
Gma04g00502 174 Gene3D - 6 154 IPR008978 -
Gma04g00502 174 SUPERFAMILY HSP20-like chaperones 14 150 IPR008978 -
Gma04g00502 174 PANTHER 17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED 7 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00502 Gma-Chr4 4487472 4488573 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00502 K13993 - gmx:111605749 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00502 04 4487472 4488573 Gma04g00502 04 4487472 4488573 ECH
Gma04g00502 04 4487472 4488573 Gma06g00492 06 4200583 4201059 GST