Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00466 ATGGCGGAGGATTACGCCCCCCTCAAGCGCAAGTACGAAGACCAACCCTCCGGCATCGAGCTCGCCAAGCAGCGTGCTAATGGCAGGGTTGGTGTGATTGTTGGTAAAGGTGGAGAGACCATTAAGTATCTCCAGTTGCAGTCTGGTGCCAAAATTCAAATTACTCGTGATATCGATGCGGACCCTAATTCTTCCACTAGGATGGTTGAGCTTATGGGCACTCCTGATGCGATTGCCTCTGCTGAGAAACTCATCAATGAAGTTCTTGCTGAGGCTGAATCTGGGGGTTCTGGCATTGTTACTCGAAGACTGACCGGACAAGCTGGGTCGGATGAATTTGTCATGAAAATCCCAAATAATAAGGTTGGCCTTATAATTGGTAAAGGTGGAGAAACGATAAAGAATATGCAAGCTTCTACTGGAGCACGGATTCAGGTGATACTTCTGCATCTTCCCCTGGGTGACACATCTACTGAAAGAACATTAAAAATTGATGGTACTCCTGAGCAAATTGAGTCTGCAAAGCAGTTAGTTTATCAAGTCATTAGTGGCGAGGGTTAG 561 0.4652 MAEDYAPLKRKYEDQPSGIELAKQRANGRVGVIVGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRMVELMGTPDAIASAEKLINEVLAEAESGGSGIVTRRLTGQAGSDEFVMKIPNNKVGLIIGKGGETIKNMQASTGARIQVILLHLPLGDTSTERTLKIDGTPEQIESAKQLVYQVISGEG 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00466 186 CDD KH-I 29 85 - -
Gma04g00466 186 SMART kh_6 109 183 IPR004087 GO:0003676
Gma04g00466 186 SMART kh_6 15 90 IPR004087 GO:0003676
Gma04g00466 186 Gene3D K Homology domain, type 1 112 185 IPR036612 GO:0003723
Gma04g00466 186 Gene3D K Homology domain, type 1 26 111 IPR036612 GO:0003723
Gma04g00466 186 CDD KH-I 112 178 - -
Gma04g00466 186 PANTHER K DOMAIN-CONTAINING PROTEIN-RELATED 23 184 - -
Gma04g00466 186 Pfam KH domain 29 87 IPR004088 GO:0003723
Gma04g00466 186 Pfam KH domain 114 179 IPR004088 GO:0003723
Gma04g00466 186 ProSiteProfiles Type-1 KH domain profile. 110 178 - -
Gma04g00466 186 ProSiteProfiles Type-1 KH domain profile. 30 85 - -
Gma04g00466 186 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 23 184 - -
Gma04g00466 186 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 26 98 IPR036612 GO:0003723
Gma04g00466 186 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 108 183 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00466 Gma-Chr4 4173704 4176049 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00466 K13210 - gmx:100797476 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00466 04 4173704 4176049 Gma04g00466 04 4173704 4176049 ECH
Gma04g00466 04 4173704 4176049 Gma06g00460 06 3941549 3946321 GST