Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00417 ATGGACCCATCTATAGTGAAGCTTCTGGAAGATGACGAGGATGAAAGTATGCATTCAGGAGCAGATGTGGAAGCATTTCAGGCTGCATTAAATAGAGACATAGGAGGAGATACTTCAACTTCTCAGCTGTCTGGTTCAGACACAGGAAGCAATAATTCATTGAGCCAGTCGTTACCGAAGTGGCCAACTTCTAGCCATGACAACCAAAGTGACTGTCATAATCAAGAGCCTAAAGTTGTGCAGCACCAAGAGCAACGACATTCATCTGAAATGGAGCAGAAGCCACAGCAACCTCTTGTTGAACAACTACATAATGTTGCTTCCAAGGATGCGATTAATCTCCCTTCGTCTCAGAAACAATCTCAAGATGAAAGTGTTCAAGGCCATACTGTACAAGCTCCCCACCAAAATTCTCAAACAAATGGAATTCAGAATTCTGAAAAAGATCCTGTCTTCAACCATGAGGCAGTCAACACACATAATTCCAATCATGGATCTCAGTATGCAAAGCTGCAGCAGATGAGTAATCAACAGGCCACCGTCAATGAACAGCCTGGAAGTCAGGTCAATCGGAATAAACAGGTACCATTTGCCATGTTGCTCCCTATGTTGATTCCCCAGCTTCCCAAAGACAGAGCCATGCAACTTCAAACTTTATTTAATAAATTGAAGAAAGATGAAATGCCCAAAGATCAGTTTGTGCGGCTTATGAAAGGTATTGTAGGGGATCAGATGCTTAGATTAGCATTAACAAAAGTGCAATTACAGACAAGATCCAACCCAGGACCCGCTGGGCAGCAGCATCCTCCTGTAAGGATGCCAAATGTTAATTCAGGTGCAACAAAATTTAATGATCCCCATGCATTAGCACAGCTGCATCAGAGAAGTATGAATGCCGCTGCAGATCAATCTAATAATACTTCTTCAGCCGTCCAAGTAAAGAATGAACCAACCTATCCAACTATGGAAATTAATGCTAAAAAATCTCAGAAACTGGATGTTCAAGTAGAATCTGAAGGAGTGCAACTAAATCAGTTACCATCATCCAGTTCTAATGCTGTTAGTCAAGAAATGGAAAGATCCTCACTTCACTTACAAGGCCTTAATAAGGAGCAACAACAGCATCTACATTTCCCTTCAGCATATGGTAGCAGTGGTGGTAATTATAACCCTTTTTCGGGCTCAACCAGTAGTTCCACATCATCTCTCAGACCACAACCTCTTGATTCACACATGAGGCAAATTCCACATCAGAGCATCAGTCCAAACCAATTAGGTGGGACAACACAGGGTTTGATTGGTTTAACAAAACTTGACCAGCAAAATTCTTTCAATGATCCCAAGAGAATGCCTGGTGGATTTGTGTCCCCTATGGTAAACAATACAGCATCACAACTAACTACAAATTCTTGGCAACCATCAGCAAACAAAGAACAAAATTCAGCCTCGTTTTCATCTGTTCCATATGTAAAAAAGGAGCCTAATGACCTGTCTACTGAGCAGCAACACAGGCATAATGTGTCTAATCAAGGCACCCTAAAGGAGGAGTTTTCAAGAGGCCTTCCAGCATCCACAAGTATGCTGCATACAACATCTTCTAGCTTGCTTCCTCTCAATTCTTCTTCCCCTTCTGTATCTCAACTTGACCCCAGTGCCACTTTAAGCTCTCAGATCCCATCAAATACATCTGTTATAAATGCAAGGACACCTCTGAAAAAACCTTCCCCTGGCCAGAAGAAACCAATTGAAGCACTTGGTTCTTCACCTCCTCCTCCAAGTAAGAAACAAAAAGTGTCTGGGGCATCTCTCGAGCCAAGCATTGAACAGCTTAATGATGTTACTGCTGTTAGTGGTGTTGATCTTAGGGAGGAGGAAGAACAATTATTTTCTGGGCCCAAGGAGGACAGTCGAGCTTCAGAAGCATTTCGCAGAGTTGTGCAAGAAGAGGAGGAAAGACTGATTTTGCAGAAAGCTCCATTGCAAAGAAAATTGATTGAGATTATAACTGAGTGTGGCTTGAAGAGTATGAGTGATGATTTGGAGAGATGCTTGTCATTGTGTGTGGAGGAAAGAATGCGAGGAGTAATAAGTAATGTGATTAGAATGTCAAAACAGCGGGTTGATTTGGAGAAGACAAGACATCGGACTGTTGTCACTTCAGATGTCCGGCAGCAAATCCTAACAATGAATAGGAAGGCAAGGGAAGAATGGGAGAAAAAACAGGCTGAAACAGAGAAGCTGCGGAAACTAAATGATGTAGATTGTAATGCTGGGATTGATGGTGACAAGGAGAAGGATGAGGGTCGCACTAAAGCAATGAAGGTGAACAAAGAAGTGGATGACAAGATGAGGACAAATGCTGCTAATGTTGCTGCCCGAGCTGCTGTTGGGGGAGACGACATGCTGTCAAAGTGGCAACTTATGGCTGAGCAAGCCAGACAGAAGAAACGTGGAGGGGGAATGGATGCTTCATCTGGTTCTCAGCCAGCTAAAGATGTGAGCCACAGATCTTCATCAACATCTGGAAGGAGTACAAAAGATAATCAAGCAAGGGAGAAAAAAGGTCCAACTTCTGGGGCTGGTAGAAAATTTGGGAGAAGTCATGCCACAACACCTCAAACTAGCATAGCTCGAAGCATATCTGTCAAGGATGTGATTGCAGTCCTGGAGAGGGAACCCCAGATGTCCAAATCATCACTCTTATATCGATTGTATGAGAGAATTCATTCTGACACCTCAACTGAATAA 2748 0.4287 MDPSIVKLLEDDEDESMHSGADVEAFQAALNRDIGGDTSTSQLSGSDTGSNNSLSQSLPKWPTSSHDNQSDCHNQEPKVVQHQEQRHSSEMEQKPQQPLVEQLHNVASKDAINLPSSQKQSQDESVQGHTVQAPHQNSQTNGIQNSEKDPVFNHEAVNTHNSNHGSQYAKLQQMSNQQATVNEQPGSQVNRNKQVPFAMLLPMLIPQLPKDRAMQLQTLFNKLKKDEMPKDQFVRLMKGIVGDQMLRLALTKVQLQTRSNPGPAGQQHPPVRMPNVNSGATKFNDPHALAQLHQRSMNAAADQSNNTSSAVQVKNEPTYPTMEINAKKSQKLDVQVESEGVQLNQLPSSSSNAVSQEMERSSLHLQGLNKEQQQHLHFPSAYGSSGGNYNPFSGSTSSSTSSLRPQPLDSHMRQIPHQSISPNQLGGTTQGLIGLTKLDQQNSFNDPKRMPGGFVSPMVNNTASQLTTNSWQPSANKEQNSASFSSVPYVKKEPNDLSTEQQHRHNVSNQGTLKEEFSRGLPASTSMLHTTSSSLLPLNSSSPSVSQLDPSATLSSQIPSNTSVINARTPLKKPSPGQKKPIEALGSSPPPPSKKQKVSGASLEPSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRASEAFRRVVQEEEERLILQKAPLQRKLIEIITECGLKSMSDDLERCLSLCVEERMRGVISNVIRMSKQRVDLEKTRHRTVVTSDVRQQILTMNRKAREEWEKKQAETEKLRKLNDVDCNAGIDGDKEKDEGRTKAMKVNKEVDDKMRTNAANVAARAAVGGDDMLSKWQLMAEQARQKKRGGGMDASSGSQPAKDVSHRSSSTSGRSTKDNQAREKKGPTSGAGRKFGRSHATTPQTSIARSISVKDVIAVLEREPQMSKSSLLYRLYERIHSDTSTE 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00417 915 PANTHER IP01149P-RELATED 40 360 - -
Gma04g00417 915 PANTHER IP01149P-RELATED 377 909 - -
Gma04g00417 915 MobiDBLite consensus disorder prediction 592 606 - -
Gma04g00417 915 MobiDBLite consensus disorder prediction 71 91 - -
Gma04g00417 915 MobiDBLite consensus disorder prediction 827 845 - -
Gma04g00417 915 MobiDBLite consensus disorder prediction 532 569 - -
Gma04g00417 915 MobiDBLite consensus disorder prediction 532 606 - -
Gma04g00417 915 CDD TAF4 606 903 IPR007900 GO:0005669|GO:0006352
Gma04g00417 915 ProSiteProfiles RST domain profile. 188 259 IPR022003 -
Gma04g00417 915 MobiDBLite consensus disorder prediction 1 97 - -
Gma04g00417 915 MobiDBLite consensus disorder prediction 33 70 - -
Gma04g00417 915 Pfam RCD1-SRO-TAF4 (RST) plant domain 191 254 IPR022003 -
Gma04g00417 915 Pfam Transcription initiation factor TFIID component TAF4 family 610 904 IPR007900 GO:0005669|GO:0006352
Gma04g00417 915 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 377 909 IPR045144 GO:0005669|GO:0006352
Gma04g00417 915 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 40 360 IPR045144 GO:0005669|GO:0006352
Gma04g00417 915 MobiDBLite consensus disorder prediction 501 515 - -
Gma04g00417 915 MobiDBLite consensus disorder prediction 114 147 - -
Gma04g00417 915 MobiDBLite consensus disorder prediction 378 410 - -
Gma04g00417 915 Gene3D Histone, subunit A 655 700 IPR009072 GO:0046982
Gma04g00417 915 MobiDBLite consensus disorder prediction 296 325 - -
Gma04g00417 915 MobiDBLite consensus disorder prediction 335 361 - -
Gma04g00417 915 MobiDBLite consensus disorder prediction 493 515 - -
Gma04g00417 915 MobiDBLite consensus disorder prediction 296 361 - -
Gma04g00417 915 MobiDBLite consensus disorder prediction 810 881 - -
Gma04g00417 915 Coils Coil 730 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00417 Gma-Chr4 3621269 3626635 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00417 K03129 - gmx:100798514 1730.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00417 04 3621269 3626635 Gma04g00417 04 3621269 3626635 ECH