Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00412 ATGAAGTCCCAAATGAAGAAAAAAAGAGTGAATCCCATTCCCAACACTCCTTGCAACGTGGCGGAAGGTTCCTGCAGGGGTCACCTTTGCATCAAGCCTTGTTGTTTCTTCTGCAGCATGAGAGAACCAGACGCATCTCTCAGAAGGGCTGGAATAGCGACCTGCTTCAGAGAAATGCCTCAAGCTCAGGGAGAGAATCATCATGAACACGTGTTGGTGCTGAGTGGACTATGGCACATCGCAATGAGCCAACCCAACGACTCAGAGTTCCCATCCCTCGGCATATTCAAGTGCATGGCAAGTCTAATCCACAAAGGCATAAACGACAGAAACTGGCTTCTCACAAATCAAAACATATACATACCCTATTACGCTGCTCACATCATTGGCTCTTACACAATGAACAAGGAGGAGTTTGCACAAAAAGCCGTGCAATCAGGTGTGATACCCCCATTATTGGACTTGCTTAGTGGGAAAATCAGTTGGGTTGAGCAAAGAGTTGCTGTTAGAGCACTTGGTCACTTGGCCAGTTACAAAAGCACTTTCGAATCAGTAGCACAGCACGAACAAGAAGTGGTGAAACTGGCCTTGAAATTGGCTTCAACTTGTTTACAAGTGGTCTATGTTGACTTCGTAGCTTTGAAGGAAAACAAAAGGCTCGAGTACCACAGAAACTTGATGACCAGAGGGGTTGGGGATTTGGAGATGGAGAATCGCAAGGCAGAGGAATGGGCTAGCCAGCTTCAGTGTTGGTCTCTTTACCTTCTGAATTGCTTTGCTTGCAAAGATAGGTCTTTGGATCTCATTTGCAAAAAAGTGTTTCTCAAGGACTTATGTGATATGTGGGGTGGGTTGATAAGTCACACGTCACCAGCAGGGGTTGGACTGATAAGAATCTTGTGTTATAGCAAAGTAGGAAGGAAAAACATTGCTGAATTACCAAAAGTTGTGAACACTCTAGGCAACCTTTCAAGATCTTCAGATGATTGGCAGTATATAGGTATCGATTGTCTTCTTCTGCTTCTCAAGGACCCAGATACGAGGTACAAAGTTCTTGATGTTGCTGCTTCTTACCTTGTTGATTTGATTGAACTTAGAAGCCTTGGGGATAAATCCAACGTGGGTGAGACCATCTCAAAGGTTCTCCTGAATTTGAAACCTAACAGAGAAAAAGTTGGAGCAGCATTATTGCAAGAGGTGGTGGATAGGAGGAACAAGGATAAGCTGCTCTCGGAGGAAAAGTTAGAGGAAACAAGGGTTTTGGTGAGTTTGATAAAGCAACAAGCGAACCACATGTTCAGGTTGGGAGAGGTTGAAGAGGCATTGTTGAAATACTCTGAAGCGCTCGGTGTTTGTCCCTTGAGGTTTAGAAAAGAGAGAATGGTGATATATAGTAACAAAGCGCAGTGTCATATTCTTCTTAAGAACGCAGATTCTGCGATCAGTGACTCAACGCGTGCTCTTTGCCTGTCCAACCCAGCAAACACTCACAGGAAAAGCCTTTGGAGGAGGTCACAGGCATATGATATGAAAGGAATGGCGAAAGAGAGCCTCATGGACTGCATAATGTTCATTAACATGACCATGCGAGTGAAGATTCCTTACCACGCAGCGCGCATGATCTCCAAACACATGGAGGCCACGTGGCTCTTTGCCACTGCTCGCTCGAAGGTGGAAAAAACAACGCAAGAATTGAACCAAGTTGGCGGGGATAATGAGAACGGTGGCAACCATGAAGAGCAACCGCGTGATCATGAGGCGAAGATGATGATGATGGAAAACAGATACAACAATCTCTTACACGGTCTGTCAACCATTATTGAAGAACCTTTTCACGCAAAAGAAGCTGGTAGGAGAAAGATGGAAAGGGCGAGAAGGAGATTCAACAAAGGTGTTGTGGCTGGACCAACACAGCAAGAACCGGATGAATTTTGTGATTTTATTACAATAAGATGCACATCCACTACAACACTATTCATGGAATTAACAGCATTAACAACATCCAGTTTCACACTAGACAGGCCTATACCCCAACCTCCAAAAAGAAAGAAAGAAGGAAATGGTTATCACAACCTTCAACGGAACCGGCGTTGGATTTGgtttcggcataggttgcggtttcggtataggatggggtttcggAGGTCTGTGCCTTATTTTCGAACCGTTTTAGACATTTCTATACCTTTTGCAATTTAA 2199 0.4343 MKSQMKKKRVNPIPNTPCNVAEGSCRGHLCIKPCCFFCSMREPDASLRRAGIATCFREMPQAQGENHHEHVLVLSGLWHIAMSQPNDSEFPSLGIFKCMASLIHKGINDRNWLLTNQNIYIPYYAAHIIGSYTMNKEEFAQKAVQSGVIPPLLDLLSGKISWVEQRVAVRALGHLASYKSTFESVAQHEQEVVKLALKLASTCLQVVYVDFVALKENKRLEYHRNLMTRGVGDLEMENRKAEEWASQLQCWSLYLLNCFACKDRSLDLICKKVFLKDLCDMWGGLISHTSPAGVGLIRILCYSKVGRKNIAELPKVVNTLGNLSRSSDDWQYIGIDCLLLLLKDPDTRYKVLDVAASYLVDLIELRSLGDKSNVGETISKVLLNLKPNREKVGAALLQEVVDRRNKDKLLSEEKLEETRVLVSLIKQQANHMFRLGEVEEALLKYSEALGVCPLRFRKERMVIYSNKAQCHILLKNADSAISDSTRALCLSNPANTHRKSLWRRSQAYDMKGMAKESLMDCIMFINMTMRVKIPYHAARMISKHMEATWLFATARSKVEKTTQELNQVGGDNENGGNHEEQPRDHEAKMMMMENRYNNLLHGLSTIIEEPFHAKEAGRRKMERARRRFNKGVVAGPTQQEPDEFCDFITIRCTSTTTLFMELTALTTSSFTLDRPIPQPPKRKKEGNGYHNLQRNRRWIWFRHRLRFRYRMGFRRSVPYFRTVLDISIPFAI 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00412 732 Gene3D - 62 405 IPR011989 -
Gma04g00412 732 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 3 626 - -
Gma04g00412 732 SUPERFAMILY ARM repeat 113 367 IPR016024 -
Gma04g00412 732 SUPERFAMILY TPR-like 423 525 IPR011990 GO:0005515
Gma04g00412 732 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 3 626 - -
Gma04g00412 732 SMART arm_5 136 177 IPR000225 GO:0005515
Gma04g00412 732 Gene3D Tetratricopeptide repeat domain 421 547 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00412 Gma-Chr4 3586979 3594329 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00412 - - gmx:100777591 1269.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00412 04 3586979 3594329 Gma04g00412 04 3586979 3594329 ECH