Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00400 ATGGTTCTACTCTTCCTCCTTCTCCTCTTCGTCCCAACCTCCTTTGGGACAATAGAAAGACTCCCAGAAGGTTCCTCACTTTCCGTTGAGAAACAAAACGACACCATCGTTTCATCCAACGGCGATTTCTCAGCTGGATTCTTCCAAGTCGGCGACAACGCCTTCTGCTTCTCGGTATGGTTCACAAGGTCCGAACGACCCACCGTTTTATGGATGGCCAACCGCGACAAGCCCGTCAACGGCAGAGGCTCACACCTCTCCCTCTGGAAAGACGGTAACGTCGTTTTGACCGACGCAGGCGGAACCATCATCTGGGCAACCGCCACCCTCTCCTCCTCACAACAACTACACCTAAAGCTAAGAAACAACGGAAACCTCGTTCTCCTCGCTTCCAAATCCACCAATACCACCATCATTTGGCAAAGCTTCGATTCCCCAACGGACACCCTTCTTACTCTCCAACCACTCACGGAGCAAGCGAGCCTCGTTTCCTCGAGAAGCACAACGAACCATtcctcgggattctacaaactctacttcgacaacgacaacgttcttcgcttactctacaagggtcCCACGTTGTCCAGCGTGTACTTTCCAGAGCCGTGGAGGCTTCCAATGGATATAGGCAGATCCACCTACAATGTTACCAAAACCGCGGTCTTAGATTCCTTTGGACGATTCACTTCCTCTGATGGCTTCCAATTCCGCTCCACCGATCATCCCAAAAAACTGTTTCGAAGACTCACCATGGATCCTGACGGTAACTTGCGTTTGTATAGCTTCGACGAGAAGCTTAAGACGTGGCAGGTGACGTGGCAGCTTATTCCCCAACCGTGTACCGTTCATGGCATTTGCGGAGCTAACAGCGCGTGCAATTACGATCGTGTTGTCGGAAGGACCTGCTATTGTTTAAAAGGGTTTAAGGTTAAGGATCCTAATGATTGGACTCAGGGGTGTGAGCCCGAGTTCGATCCTTCTGTTTTTTCTTGCAACAGTGGCGAGTCTATGGGTTTTCTCCATTATCCAACCACGGAGTTGTACGGCTATGACTGGAACATAACAGTGGTTAATAGCTTGGAGGAATGCCTGAATCTATGCCTGGAACTTTGTGATAAGTGCGTAGCTGTTCAATTCAAGTTCAACGATGTTGCTAAGTATAATTGTTACCCCAAAACGATGGTATTCAATGGAAGGTATACTCCTAATTTCGACGGAGAGATGTATCTGAAGTTGCCGCAAGCGATTTTGGGCTCATCTGCCACGCCTCTTAATAAGCATTCAACGATGAATTGTACCGCTGGTTTGTCTCAACAGTTGGAGAGGTTTTACGAAGCGCCTAGTAGAAACTCCACGTTGAGTTTCTTGGTTTGGTTCGCTTGCGGGATGGGGGTGTTTGAGTTGTCCACCATTTTCCTGGTGTGGTTCTTCTTGTTCAGAACCAGCAAGAACTCTGAGACGGTGGATCAACAACGGCACCTTCTTTCCGCCACTGGGTTTCAGAGgagCCCTATGGAAATTCACAGCCTTGAGAACAGTAGGGGCATAGAGCAGCGACGGTTGGTGATGTGGGTAACGGACAAGATAAACGATGCACCCACGAGTGGGTTTTGGATTGAGGAGATACTTGATCCCAACTTGGAAGGCCAATGCCAAGTTTCGCAAGTTGAGGTTTTGGTTAAGGTGGCTTTGCAGTGTGTGCAAGATGACATGAATCAAAGACCCTCCATGAGCCAAGTAGTGGAGATGCTTCTGTCCCATGAAAATAATGTGCTCCCTCGTTAA 1788 0.4698 MVLLFLLLLFVPTSFGTIERLPEGSSLSVEKQNDTIVSSNGDFSAGFFQVGDNAFCFSVWFTRSERPTVLWMANRDKPVNGRGSHLSLWKDGNVVLTDAGGTIIWATATLSSSQQLHLKLRNNGNLVLLASKSTNTTIIWQSFDSPTDTLLTLQPLTEQASLVSSRSTTNHSSGFYKLYFDNDNVLRLLYKGPTLSSVYFPEPWRLPMDIGRSTYNVTKTAVLDSFGRFTSSDGFQFRSTDHPKKLFRRLTMDPDGNLRLYSFDEKLKTWQVTWQLIPQPCTVHGICGANSACNYDRVVGRTCYCLKGFKVKDPNDWTQGCEPEFDPSVFSCNSGESMGFLHYPTTELYGYDWNITVVNSLEECLNLCLELCDKCVAVQFKFNDVAKYNCYPKTMVFNGRYTPNFDGEMYLKLPQAILGSSATPLNKHSTMNCTAGLSQQLERFYEAPSRNSTLSFLVWFACGMGVFELSTIFLVWFFLFRTSKNSETVDQQRHLLSATGFQRSPMEIHSLENSRGIEQRRLVMWVTDKINDAPTSGFWIEEILDPNLEGQCQVSQVEVLVKVALQCVQDDMNQRPSMSQVVEMLLSHENNVLPR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00400 595 ProSiteProfiles PAN/Apple domain profile. 332 414 IPR003609 -
Gma04g00400 595 PANTHER OS07G0415500 PROTEIN 2 503 - -
Gma04g00400 595 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 2 503 - -
Gma04g00400 595 PANTHER RECEPTOR PROTEIN KINASE ZMPK1-RELATED 504 591 - -
Gma04g00400 595 CDD PAN_AP_plant 331 414 - -
Gma04g00400 595 Pfam S-locus glycoprotein domain 235 312 IPR000858 GO:0048544
Gma04g00400 595 Pfam D-mannose binding lectin 68 156 IPR001480 -
Gma04g00400 595 SMART blect_4 27 146 IPR001480 -
Gma04g00400 595 CDD B_lectin 31 146 IPR001480 -
Gma04g00400 595 SUPERFAMILY alpha-D-mannose-specific plant lectins 55 193 IPR036426 -
Gma04g00400 595 Gene3D - 17 144 IPR036426 -
Gma04g00400 595 PANTHER OS07G0415500 PROTEIN 504 591 - -
Gma04g00400 595 Gene3D Transferase(Phosphotransferase) domain 1 460 592 - -
Gma04g00400 595 ProSiteProfiles Bulb-type lectin domain profile. 21 141 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00400 Gma-Chr4 3471143 3473548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00400 542 585 Receptor kinase-like Gene Family AT4G23280 43.182 4.79e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00400 - - gmx:100816469 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00400 04 3471143 3473548 Gma04g00400 04 3471143 3473548 ECH