Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00394 ATGTTTGGCTATTTGTATACGGAATTGCAATATTCCAAGAGAATTCCCAGAATGGGGAAAGCAGTAAGCATTGATGAGATTCCCGATGAGTGTTTGGGTTGTATTTTCCAGTTATTTTCCCCCGGCGAGCGCAAGATGTTCTCCCTCGTATGTAGCCGCTGGCTGAAGATCGAAGGACAGACCTATCAGCGTCTGTCCCTGACCGCGGATGGTCTACTGTCAATCCCATGTACTTTCTCTCGCTTTTCTTCCCTCACCGAACTCACTCTAATAAATTCCCTTAGTAAGAGCATTGGGGACGAAGCTCTCACCCTCCTTACTCACCGCTGCTGCCCTAATCTCACCTTCTTCACTCTCCACTCTTCTATTCACTCAGACGCTTGCTTGGAGAATTTCGCCATGAACCACAAGGGTTTGAAGAAGTTTTCGGCCGTGTCTTGCATTTTCACATACAAAGGCTTGAAAGCATTCATGGATCATTGCGTCTCTCTGGAAGAACTCCGCCTCAAGTATCTTAACTCAAACCCCAATATTGCCAACGCCGACGAGGATGGGTTTGTAACGTCGTCATCGCTCAAAGCCCTTTATTTGGAGGGCGTTGATTTTTCTATCTTAAAAGCGATTTCAAAACGTTCCAGCTTAGAAGTTTTGCATCTTGAGATGATTGGCATGTGCAGTGACGAAGGACTTGTTGCAGTTTTGGAGGGTTGCAACCTTTTAAGAGAACTTCGTATCCGTAGAAGCTATTGTTGGGAGGCCAACCTTATGGGTGATAAAGTTTTGATAGCCATTGTTGAATGTTGTCCTAACCTTCAGGAGTTGGTTCTCGATGGGTTGAATCCCAGCACCAAAGCGAGTTTGGAAATGTTGGCATTCAAATGCCGGAGTATAGGCCGATTGGCGTTGCGCGGAAAAAGCTCGATTAGCTATAGCGACTTAGCTTCCATATTGGCCAAACTGTTTCAGTCCGATGGATACATGCAATCTGCAGACGCTATGGGTTTTTTCGgtgtgaggaaggAATTGCAATATTCCAACATAATCACCAGAATTGACGACATCCCCGACAACTGCTTGGCTTCTATTTTCCAGTTATTTCCCCCTGTCGACCACAAGAACTTCTCCCTCGTTTGTCGCCGCTGCCTCAAGGTTCAAGGACAGACCCATCACCGTCTCTGCCTCACCCTTCCCTACTCAAAATTCCTCGCATCTATTTTTACTCGTTTCGATTCCGTTACCGAACTCACTCTCCAATGTCTTAATCTCATGAGCATGTGCGATGGAAATCTAGTCGTCATTTCAGACCTCTGCCCTAATCTCTCGTACGTTGGCTTGGAGGTCTTAGCCAGGAGTTGCGAGCGTTTAAAGAAGTTCTCTTGTACATCTTGCACTTTTGGACTCAACGCCATTGACGCACTCATACATCATTGCAGTTCTCTGGAAGAACTCTCCATGGAGCATTCAAGTGTCAAAACCGACGGAGCTGAATTTGTAAATTTCTATCCTTTAATTCGCGCCAAGAATTTGACTACTGTGAAGATTGTTCAGTCCTCTGTTGAGGAGTACTGGGATAGGTTTTTTCATTCGTTGGCAAGCCAGGTCACGAGCTTGCTGGAAGTTCGCCTCGATGGGTTCGGAGTTAGCGATAATGGTTTGAAAGCAATTTCAAAATTTCCTAATTTAGAAACTCTTCATCTCGTGAAGACCCCTAAGTGCACCGACGCAGGGCTCGTTGAAGTTGCGGAGGGATGCAACAAGAGTTTAAGAAAACTTGGTATTGAAGAGTCCCTTCAAAAGGGCCCCAACAAAATAGGTAACAATGGTTTGAGAGCAGTTGCTAAGTGTTGTGCTAATCTTCAAGAATTGGTTCTCATTGGTATGAATCCAAGCAAAGCGAATTTGGAAATTTTGGTATCCAATTGCCAGAGTCTAAAGCATTTGGGGTTGTGGGGAAGCAATAAGTTTGGCGACACTGAGATACGCTGCATTGCGGGAAAATGTGTGGCGTTGAAGGAACTCCACGTCGAGGGTTGCCCCCGTGTTTCTGATCGTGACATGGAGACGTTGGCTGCTAAGAGTGAAGGTTTTCAAGTGTAA 2097 0.453 MFGYLYTELQYSKRIPRMGKAVSIDEIPDECLGCIFQLFSPGERKMFSLVCSRWLKIEGQTYQRLSLTADGLLSIPCTFSRFSSLTELTLINSLSKSIGDEALTLLTHRCCPNLTFFTLHSSIHSDACLENFAMNHKGLKKFSAVSCIFTYKGLKAFMDHCVSLEELRLKYLNSNPNIANADEDGFVTSSSLKALYLEGVDFSILKAISKRSSLEVLHLEMIGMCSDEGLVAVLEGCNLLRELRIRRSYCWEANLMGDKVLIAIVECCPNLQELVLDGLNPSTKASLEMLAFKCRSIGRLALRGKSSISYSDLASILAKLFQSDGYMQSADAMGFFGVRKELQYSNIITRIDDIPDNCLASIFQLFPPVDHKNFSLVCRRCLKVQGQTHHRLCLTLPYSKFLASIFTRFDSVTELTLQCLNLMSMCDGNLVVISDLCPNLSYVGLEVLARSCERLKKFSCTSCTFGLNAIDALIHHCSSLEELSMEHSSVKTDGAEFVNFYPLIRAKNLTTVKIVQSSVEEYWDRFFHSLASQVTSLLEVRLDGFGVSDNGLKAISKFPNLETLHLVKTPKCTDAGLVEVAEGCNKSLRKLGIEESLQKGPNKIGNNGLRAVAKCCANLQELVLIGMNPSKANLEILVSNCQSLKHLGLWGSNKFGDTEIRCIAGKCVALKELHVEGCPRVSDRDMETLAAKSEGFQV 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00394 698 SUPERFAMILY F-box domain 349 384 IPR036047 GO:0005515
Gma04g00394 698 SUPERFAMILY RNI-like 44 311 - -
Gma04g00394 698 PANTHER F-BOX/LRR-REPEAT PROTEIN 8-RELATED 501 691 - -
Gma04g00394 698 PANTHER F-BOX/LRR-REPEAT PROTEIN 8-RELATED 23 199 - -
Gma04g00394 698 PANTHER F-BOX/LRR-REPEAT PROTEIN 8-RELATED 349 485 - -
Gma04g00394 698 PANTHER F-BOX/LRR-REPEAT PROTEIN 8-RELATED 204 319 - -
Gma04g00394 698 Pfam F-box domain 351 382 IPR001810 GO:0005515
Gma04g00394 698 Gene3D Ribonuclease Inhibitor 505 698 IPR032675 -
Gma04g00394 698 PANTHER UNCHARACTERIZED 204 319 - -
Gma04g00394 698 PANTHER UNCHARACTERIZED 501 691 - -
Gma04g00394 698 PANTHER UNCHARACTERIZED 349 485 - -
Gma04g00394 698 PANTHER UNCHARACTERIZED 23 199 - -
Gma04g00394 698 Gene3D Ribonuclease Inhibitor 254 504 IPR032675 -
Gma04g00394 698 Gene3D Ribonuclease Inhibitor 36 251 IPR032675 -
Gma04g00394 698 SUPERFAMILY F-box domain 14 56 IPR036047 GO:0005515
Gma04g00394 698 SUPERFAMILY RNI-like 403 690 - -
Gma04g00394 698 SMART LRR_CC_2 294 319 IPR006553 -
Gma04g00394 698 SMART LRR_CC_2 641 666 IPR006553 -
Gma04g00394 698 SMART LRR_CC_2 558 583 IPR006553 -
Gma04g00394 698 SMART LRR_CC_2 667 692 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00394 Gma-Chr4 3393618 3398213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00394 - K10273 gmx:100791336 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00394 04 3393618 3398213 Gma04g00394 04 3393618 3398213 ECH