LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma04g00360	ATGCAAGCGGTGGGTAGAATAATTAGTCAGGGTGTGTACACGTTTTCGGGGCCGTTTCATCCGTTCGGTGGCGCCGTTGATATTGTGGTGGTGGAACAGCAAGATGGAACTTTCAAGTCCTCTCCTTGGTACGTTCGATTTGGCAAATTCCAAGGGGTTTTGAAGGCAAGGGAAAAGGTTGTTGATATCTGTGTCAATGGGGTGCAAGCTGGTTTCCAAATGCATCTTGATCATAAAGGGGAAGCCTTTTTTCTCAGGGAAATCGATGCACAAGAAGAAGAAGCCATTTTGATGTTTCCTTCTTCTTCTGGCGATGATGCAGATGATCAGACTCGCTCTCACTCTCTCAGGTCCGAGAGTTTGAATTATGATGCTGCTGCTGAGGTTGTGGGAAGGACTACTAGCTCTCGCCGCTCCCGGATACTTGGCCTTGTGTTTGGGAGAAGGTCTTTGAAGAGGGAAgatggtgcgggtgttggtgatggtgatggtgttggtgatggAATTGGGAACAGGGTTGGTTCCTTGGAGCGCGCCGAGATTGCGGCTAACTTGTTAGACATCAATTGGTCCACCAATCCCTCCGCTGAACAAGGGCAAGATGTTATTGCTAACCCGTCTGGGGATGGAGAGGTGGTTGTGGAGAATGGCGAATTGAATGAGGAAGCTTGTTTTGGTGGCGAGTGTGACTTGAATTGGAAGGAAATTGTGTATGACATTGCAGAGTCTGATGTGCAAGTTGCATGTGTGGAGGTGGAGGTTGAAGCATGCGTAGAAAAGGAATTGAATGGAGAAGAGGTTTCTATTGATGCGCCGGGTGAAAATAGTAATGAATCATCATCAGAGACTTCCAAGTTGGGAGTGGATTGTTCTAGTGAACAAGCTCATGAGGTGATGTACCTTGCTGGCCCAGAATGTGAAGAAGTCCATGTCCATGTCCACGATGAAGTCTTGCATGGTGCAACTGTACTGCTAGCTGAGGATACAGAAGCTGAGGAAGTTATTGAGAATGCTGATCTTGAGTCTCATTCTCGGATTCAACAAACAGATAGTTCAGATTCTGATGATATTAGGTACAATGAGGTGGTTGTTGAAGAGCAACCAACATCTCCAAAATCTCAAACTGTCAAAATGGGCCTAGGACATTATTCAAATGAGAAAGTTGAGCCAAATTGTATTATCAAACCTTCCAGTTACAGCATCTTGGCTGACCAAGCCTTAGATGACAATAATATGAAGGACAAAGATGTCTCTAGCACACTATCATCTCCTCTGGATTCTGTTGATGATTCTTTACCTAGAAAAGCATCAAGGAGATCATCATCACCAAGTTCAGAGGACGAAAATTTCCTTTTTAGTGGCCATGACAAAAGTGTTATCAATGATCGATTCGAGAGATCATTCTCCCCTGAACATGTAGATAAAGAAGATCATGTTTCTTATGGGAATGACAGTGAAAAGTTAACAGCAATATCCAATCCCATAGACATTCCTATGAACAAAGCTGCTGGGGAGGAAGTTGTGCAGTTTTCGGGATCCTTGCCAAATATTTCTTCTGGTAGTGACATCATGGTCGAACACAATGTTCGATATCCTTTATGTCAATCACTGGACTCAAAATCCACATCCTTGCCATGGGCATTTCCTGGAAAAGATGACTTGGAATGTCTAAAATCAGACGAAGACAAAGGAAACCAGTTATCACATGAAGGGCAAGGTGCCAAGGATTACAATGATTCTGGGGAACTCAAAGGAGATCCATCAACACGCAACCCTTCCGCTGGTGGAAGTTGGAGAATTTGGCCTTTCTCCTTGAGGAGAGAAGGATCTAGAAAGTCTATGTTGCCCCCTTCTCCAAGTGATTCCAAAAACACTACTTTTGTTAATTCTCCAGAGAATACGATTAGTACTGATATGAACAAAAATGAGCTCAAACCCAATTTAATGAAAAAGAAGGTTAAGGAAATGACTCCAACCTCTGAACAGCTAGCCTCGTTGAATCTGAAGGATGGGATGAATACTGTAACCTTCACTTTCTCTACAGCTGTGCTGGGGAAGCAGCAGGTTGATTGTCGAATATATTTATGGAAATGGAACGCTCGTATAGTGATCTCAGATGTGGATGGTACAATTACAAGgtcagatgttcttggtcagttcatgcctttggtTGGTATTGACTGGTCACAGACAGGTGTTGCACATTTATTCTCCGCTATCAAGGAAAATGGTTATCAACTGCTTTTTCTCAGTGCTCGTTCAATTTCTCAGGCCTATATTACACGGCAATTCTTACTAAACCTTAAACAGGATGGAAAAGTTTTACCAGATGGTCCTGTTGTTATTTCCCCTGATGGACTTTTTCCCTCTCTATATCGAGAAGTTATTAGGAGGGTTCCTCATGAATTCAAAATAGCATGCTTAGAGGACATCAAGGCACTTTTTCCTTCTGATAGCAGTCCATTCTATGCTGGTTTTGGTAATAGGGATACGGATGAAATCAGCTACCTTAAGGTTGGAATTCCCCTAGGAAAAATTTTCATTATTAATCCCAGGGGAGAGGTGGTTATAAACCGCCGTGTTGACGCAAAATCATATACTTCTCTGCATGCTCTTGTGAATGGAATGTTCCCCCCTACGAGCTCTTCTGAGCAGGAGGACTTTAATTCATGGAATTTCTGGAAACTACCCCCTCCTGCCATAGATATTTGA	2712	0.4189	MQAVGRIISQGVYTFSGPFHPFGGAVDIVVVEQQDGTFKSSPWYVRFGKFQGVLKAREKVVDICVNGVQAGFQMHLDHKGEAFFLREIDAQEEEAILMFPSSSGDDADDQTRSHSLRSESLNYDAAAEVVGRTTSSRRSRILGLVFGRRSLKREDGAGVGDGDGVGDGIGNRVGSLERAEIAANLLDINWSTNPSAEQGQDVIANPSGDGEVVVENGELNEEACFGGECDLNWKEIVYDIAESDVQVACVEVEVEACVEKELNGEEVSIDAPGENSNESSSETSKLGVDCSSEQAHEVMYLAGPECEEVHVHVHDEVLHGATVLLAEDTEAEEVIENADLESHSRIQQTDSSDSDDIRYNEVVVEEQPTSPKSQTVKMGLGHYSNEKVEPNCIIKPSSYSILADQALDDNNMKDKDVSSTLSSPLDSVDDSLPRKASRRSSSPSSEDENFLFSGHDKSVINDRFERSFSPEHVDKEDHVSYGNDSEKLTAISNPIDIPMNKAAGEEVVQFSGSLPNISSGSDIMVEHNVRYPLCQSLDSKSTSLPWAFPGKDDLECLKSDEDKGNQLSHEGQGAKDYNDSGELKGDPSTRNPSAGGSWRIWPFSLRREGSRKSMLPPSPSDSKNTTFVNSPENTISTDMNKNELKPNLMKKKVKEMTPTSEQLASLNLKDGMNTVTFTFSTAVLGKQQVDCRIYLWKWNARIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSAIKENGYQLLFLSARSISQAYITRQFLLNLKQDGKVLPDGPVVISPDGLFPSLYREVIRRVPHEFKIACLEDIKALFPSDSSPFYAGFGNRDTDEISYLKVGIPLGKIFIINPRGEVVINRRVDAKSYTSLHALVNGMFPPTSSSEQEDFNSWNFWKLPPPAIDI	903

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma04g00360	903	MobiDBLite	consensus disorder prediction	609	641	-	-
	Gma04g00360	903	MobiDBLite	consensus disorder prediction	615	641	-	-
	Gma04g00360	903	SUPERFAMILY	HAD-like	694	846	IPR036412	-
	Gma04g00360	903	MobiDBLite	consensus disorder prediction	337	357	-	-
	Gma04g00360	903	PANTHER	LIPIN	1	903	IPR026058	-
	Gma04g00360	903	MobiDBLite	consensus disorder prediction	557	583	-	-
	Gma04g00360	903	MobiDBLite	consensus disorder prediction	413	452	-	-
	Gma04g00360	903	Pfam	lipin, N-terminal conserved region	1	94	IPR007651	-
	Gma04g00360	903	MobiDBLite	consensus disorder prediction	265	287	-	-
	Gma04g00360	903	SMART	lns2	702	858	IPR031315	-
	Gma04g00360	903	Pfam	LNS2 (Lipin/Ned1/Smp2)	654	878	IPR013209	-
	Gma04g00360	903	MobiDBLite	consensus disorder prediction	557	597	-	-
	Gma04g00360	903	MobiDBLite	consensus disorder prediction	270	287	-	-
	Gma04g00360	903	PANTHER	GH19076P	1	903	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma04g00360	Gma-Chr4	3081783	3090856	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma04g00360	K15728		-	gmx:100811824	1693.71

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma04g00360	04	3081783	3090856	Gma04g00360	04	3081783	3090856	ECH
	Gma04g00360	04	3081783	3090856	Gma06g00349	06	3021851	3029463	GST
	Gma17g02326	17	41292130	41296818	Gma04g00360	04	3081783	3090856	PCT
	Gma14g00717	14	7148906	7150311	Gma04g00360	04	3081783	3090856	PCT
	Gma04g00360	04	3081783	3090856	Gma17g02326	17	41292130	41296818	PCT
	Gma04g00360	04	3081783	3090856	Gma14g00717	14	7148906	7150311	PCT