Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00350 ATGGAGAGAACATTGTCATCCCTTCTACAGATTCAGCCTCCAACCTATGGAAACTTAGTCACTATTCTCAGCATCGACGGAGGTGGTATCAGGGGCATTATCCCCGCAACTATTCTTGCTTTCCTTGAAGCGCAACTTCAGGAGTTGGACGGTGAGGATGCAAGGCTTGCAGACTATTTTGATGTGATTGCAGGAACAAGCACAGGAGGTATTGTAACAGCTATGTTAACTGCTCCAAATGATAATCAGCGTCCTCTATTTGCTGCCAAGGATATCAAGCCCTTTTACTTGGAACATTGCCCAAAGATTTTCCCACAACACAGAGGTCTCCTTGCTTGGATGCTCGACTCTCCGACATATGCATCAGCACTTCTGCCGCACCTACTTATCTTCCAGCCTACCACTTCAACAACAAAGATTCAGAAGGGAACATGCACCAATTCAACCTTATTGACGGTGACGAAAGAGAATTTGGAAAAACTTAGCCAAATTGGTGAGAGGTTGTTAAAGAAACCAGTATCTCAGATCAATTTGGAGGATGGTCTGTTTGAGCCGGTAGGAAATGGGGAGACCAATGAAGATGCTCTCAAAAGGTTTGCAAAAATACTTTTGAAAGAGAGGAGGCTCCGAGAATTGAAATCCCCTCACACTAAGAAGGTCCCAAGCCACTTTGCTCATGAAGTCTGA 687 0.4469 MERTLSSLLQIQPPTYGNLVTILSIDGGGIRGIIPATILAFLEAQLQELDGEDARLADYFDVIAGTSTGGIVTAMLTAPNDNQRPLFAAKDIKPFYLEHCPKIFPQHRGLLAWMLDSPTYASALLPHLLIFQPTTSTTKIQKGTCTNSTLLTVTKENLEKLSQIGERLLKKPVSQINLEDGLFEPVGNGETNEDALKRFAKILLKERRLRELKSPHTKKVPSHFAHEV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00350 228 PANTHER XYLOSE ISOMERASE 144 219 - -
Gma04g00350 228 PANTHER XYLOSE ISOMERASE 1 115 - -
Gma04g00350 228 SUPERFAMILY FabD/lysophospholipase-like 18 117 IPR016035 -
Gma04g00350 228 PANTHER PATATIN 1 115 - -
Gma04g00350 228 PANTHER PATATIN 144 219 - -
Gma04g00350 228 Pfam Patatin-like phospholipase 23 86 IPR002641 GO:0006629
Gma04g00350 228 Gene3D Cytosolic phospholipase A2 catalytic domain 11 145 - -
Gma04g00350 228 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 228 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00350 Gma-Chr4 3012309 3014113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00350 139 218 Miscellaneous Gene Families AT2G26560 42.683 2.88e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00350 - - oeu:111386395 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00350 04 3012309 3014113 Gma04g00350 04 3012309 3014113 ECH