Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00347 ATGCCCCATTTTTCTCTCTCCCCTCTCTCCTGTGCACCTTCTCCTCTCCCACCTCGCCGCCGAATCTTTCTCGCTCCTCCCCGAACCGCCGCATCTTCCGCCACCGACGCCGCTTCCTCTTCTACTTCCTCTTCCGCTTCGAATTTCGCTCCCAAAGTCGTCGTCACCAGAGAGCGCGGCAAGAACGCCAAGCTTATCGCCGCTCTGGCTAAACATGAAATCAATTGTTTGGAGCTTCCTCTCATTGAGCACATTCAAGGACCTGATTTAGGCAGGCTTCCTTCTGTATTAGGTGACAATGCATTTGATTGGGTTGTGATAACGTCTCCAGAGGCAGGTTCTGTCTTTCTAGAGGCATGGAGATCTTCTGGGATGCCTCATGTCAAAATAGGTGTTGTTGGGGCTGGTACTGCAAGCATTTTCAAGGAAGCTTTGCAGTCTTCAAACCGATCAATTGATATTGCCTTTGTGCCATCAAAAGCAACAGGAAAGGTTTTGGCTACTGAGCTTCCTAAGATTGGAAATAAATGCACCGTTCTCTATCCTGCTTCTGCAAAGGCTAGCAATGAGATTGAGGAAGGACTTTCAAACCGTGGATTTGAGGTTACTAGGATGAATACATATACAACGGTGCCAGTTCAACATGTTGACCATACGGTTCTAAAGATAGCACTTGCTGCCCCTGTTGTTACAGTAGCTTCACCATCTTCTATTCGTGCCTGGAAGAATCTTCTTTCAGATTCTGAGTGGAACAATTCTGTTGCATGCATTGGTGAGACAACTGCTACAATGGCAAGAAGTTTAGGTTTCACAAATGTGTACTATCCAGCACAACCAGGCATCGAAGGCTGGGTAGAAAGCATTCTTGAAGCATTAGGTTCCTATGATGAATTATTGAGcaaaagtcaaaagaagaaaattttaaatactttggagaaaaattga 945 0.4444 MPHFSLSPLSCAPSPLPPRRRIFLAPPRTAASSATDAASSSTSSSASNFAPKVVVTRERGKNAKLIAALAKHEINCLELPLIEHIQGPDLGRLPSVLGDNAFDWVVITSPEAGSVFLEAWRSSGMPHVKIGVVGAGTASIFKEALQSSNRSIDIAFVPSKATGKVLATELPKIGNKCTVLYPASAKASNEIEEGLSNRGFEVTRMNTYTTVPVQHVDHTVLKIALAAPVVTVASPSSIRAWKNLLSDSEWNNSVACIGETTATMARSLGFTNVYYPAQPGIEGWVESILEALGSYDELLSKSQKKKILNTLEKN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00347 314 Gene3D - 97 202 IPR036108 GO:0004852|GO:0033014
Gma04g00347 314 SUPERFAMILY HemD-like 52 293 IPR036108 GO:0004852|GO:0033014
Gma04g00347 314 Pfam Uroporphyrinogen-III synthase HemD 65 286 IPR003754 GO:0004852|GO:0033014
Gma04g00347 314 Gene3D - 203 292 IPR036108 GO:0004852|GO:0033014
Gma04g00347 314 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 16 296 IPR039793 GO:0004852|GO:0006780
Gma04g00347 314 CDD HemD 53 288 IPR003754 GO:0004852|GO:0033014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00347 Gma-Chr4 2976303 2985578 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00347 K01719 - gmx:100808086 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00347 04 2976303 2985578 Gma04g00347 04 2976303 2985578 ECH
Gma04g00347 04 2976303 2985578 Gma06g00335 06 2914616 2924696 GST