Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00340 ATGGACCTCCGTGAATCGATAAGCAACCAAACCGACGTCGCTCTGAGCATCACAAAGCTCCTGTTGTCGAAAAACGCTCGGGACAGTAACCTCGTGTACTCGCCGCTGTCGTTGCACGTTGTTCTGAGCATCATCGCTTCTGGCTCCAAGGGCCCCACACTCGATCAGCTTCTCTCCTTCCTCCGATCCAAGTCCACCGACCATCTCAACTCCTTCGCCTCTCAGCTCGTCGCCGTCGTGCTCTCCGACGCCGCTCCCGCCGGCGGGCCTCGCCTCTCCTTCGCCGACGGCGTGTGGGTTGAGCAATCCCTCTCTCTTCACCCTTCCTTCAAACAACTTGTCAGTGCTCAATACAAGGCCACTTTGGCTTCAGTTGATTTCCAGACCAAGGCGGTTGAAGTGACAAATGAAGTTAATTCATGGGCTGAAAAGGAGACAAATGGCCTTGTTAAAGACCTTCTTCCTCCTGGATCAGTTGACAATTCAACCAGACTTATCTTTGCAAATGCACTGTACTTCAAAGGAGCATGGAATGAGAAGTTTGATGCTTCAATAACAAAAGACTACGATTTTCACCTTCTTAATGGCAGTTCAGTCAAGGTTCCCTTCATGACGAGCAAGAAGAAGCAGTTTATTATGGCTTTTGATAGTTTCAAAGTCCTTGGTCTTCCCTACAAGCAAGGCGAAGATAAGCGCCAATTCACCATGTACTTTTTCCTTCCAGAAACAAAAGATGGGCTGTTAGCTTTGGCTGAGAAGTTGGCTTCTGAATCTGGGTTCTTGGAACGCAAGCTTCCTAACCAAAAAGTGGAAGTAGGGGACTTCAGGATCCCAAGATTCAAAATTTCTTTTGGGTTTGAAGTCTCTAATGTGCTGAAGGAGCTGGGAGTGGTTTTGCCTTTCTCTGTTGGAGGGTTGACAGAAATGGTGGACTCTCCTGTGGGTCAAAACCTATGTGTTTCCAACATATTTCACAAGTCTTTTATTGAAGTAAATGAAGAAGGCACTGAAGCTGCAGCGGCCACCTCTGCAACTATACGATTGAGGAGTGCGATGCTTCCAACTAAAATAGACTTCGTAGCTGACCATCCTTTCTTGTTCCTGATCAGAGAAGATTTAACTGGAACAGTACTCTTTATTGGGCAGGTGCTCGATCCTCGTGCGGGATGA 1170 0.4769 MDLRESISNQTDVALSITKLLLSKNARDSNLVYSPLSLHVVLSIIASGSKGPTLDQLLSFLRSKSTDHLNSFASQLVAVVLSDAAPAGGPRLSFADGVWVEQSLSLHPSFKQLVSAQYKATLASVDFQTKAVEVTNEVNSWAEKETNGLVKDLLPPGSVDNSTRLIFANALYFKGAWNEKFDASITKDYDFHLLNGSSVKVPFMTSKKKQFIMAFDSFKVLGLPYKQGEDKRQFTMYFFLPETKDGLLALAEKLASESGFLERKLPNQKVEVGDFRIPRFKISFGFEVSNVLKELGVVLPFSVGGLTEMVDSPVGQNLCVSNIFHKSFIEVNEEGTEAAAATSATIRLRSAMLPTKIDFVADHPFLFLIREDLTGTVLFIGQVLDPRAG 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00340 389 CDD serpinP_plants 8 386 - -
Gma04g00340 389 Gene3D Antithrombin, subunit I, domain 2 28 333 IPR042178 -
Gma04g00340 389 SMART serpin2 15 386 IPR023796 -
Gma04g00340 389 Gene3D - 177 381 IPR042185 -
Gma04g00340 389 Pfam Serpin (serine protease inhibitor) 9 386 IPR023796 -
Gma04g00340 389 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 16 388 IPR000215 GO:0004867|GO:0005615
Gma04g00340 389 SUPERFAMILY Serpins 6 386 IPR036186 -
Gma04g00340 389 ProSitePatterns Serpins signature. 359 369 IPR023795 -
Gma04g00340 389 PANTHER SERPIN-ZX-LIKE 16 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00340 Gma-Chr4 2903377 2906267 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00340 K13963 - gmx:100775287 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00340 04 2903377 2906267 Gma04g00340 04 2903377 2906267 ECH
Gma04g00340 04 2903377 2906267 Gma06g00327 06 2838818 2841869 GST