Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00322 ATGCTAGAGGCAATGGAAAGTTCGGTCAATGGTGGCTTCTCCCATTTGCAGAGCTGTGGAGATAGCAGCGAAGAAGAGTTATCGGTGCTTCCTCGTCACACCAAAGTTGTCGTAACCGGAAATAACCGCACCAAATCGGTGCTCGTTGGTCTTCAAGGTGTCGTTAAGAAAGCCGTTGGACTAGGCGGATGGCATTGGCTGGTTCTTACAAATGGTATTGAAGTTAAGCTACAAAGGAATGCTCTTAGCGTGATTGAAGCACCCACCGGTAATGAGGAAGACGATGACCTTGAGTTTGAAAATATGCCGTGGAATGGATCAGATATGGCATCGGACGACACACACAAGTCCCACAAGTCGAGGCATAGAATGCATAGAACATTGGGATCATCTCACAAAACCACGAGTAGGTCCTTCTCTGCCGATTCACAGTCAAAGGGGTCCGTTTCTATGCCGCTTCATGGCTCCACGAAGGTGGACTTGAGCAAACTTGAAATGGCTGCACTGTGGAGATATTGGCGACATTTTAATCTAGTGGATGCGTTCCCAAACCCATCAAAAGAGCAGCTAGTAGACGTTGTTCAGAGGCATTTCATGTCGCAGCAAATGGACGAATTGCAGGTGATTGTGGGATTTGTCCAAGCTGCAAAGAGGCTTAAGACAGTGTGGAAATGA 675 0.4741 MLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMPWNGSDMASDDTHKSHKSRHRMHRTLGSSHKTTSRSFSADSQSKGSVSMPLHGSTKVDLSKLEMAALWRYWRHFNLVDAFPNPSKEQLVDVVQRHFMSQQMDELQVIVGFVQAAKRLKTVWK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00322 224 Gene3D - 138 224 IPR038291 -
Gma04g00322 224 PANTHER SAP30 1 223 IPR024145 -
Gma04g00322 224 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 164 217 IPR025718 GO:0005515
Gma04g00322 224 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 223 - -
Gma04g00322 224 MobiDBLite consensus disorder prediction 107 152 - -
Gma04g00322 224 MobiDBLite consensus disorder prediction 131 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00322 Gma-Chr4 2750288 2755112 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00322 - - gmx:100787225 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00322 04 2750288 2755112 Gma04g00322 04 2750288 2755112 ECH
Gma04g00322 04 2750288 2755112 Gma06g00307 06 2673627 2687739 GST