Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00301 ATGCGATTTCCCAAGAGGCACTTCTCCTTTTCTCTCTCCAACTTCTCTCCTCCTCTCCCACCTCTTTTCTCTCCTCGCCTTCTTTTTGTCTCTGGAATCGGCGCCAAACCTCCTCGCTCACTCGCCAACGCCACGTCACCAGGAGTTAATCCGTTGTTGCATGCTCAATATTCAATGGATGGGAACCATGAAATTGATGTACATGATTCAAGATTGAGGGATTTGCCTGGCCGTGATGGCAGCAAACAGCCACGTGTATGGTCATCTCCTGAAAATGGAGTTAAAACTGAAATAGGCAAGCAGATATTTTGTAACCGGTCACTGAATATGAAGAACATTATTGCTGTGGGATTTGACATGGATTATACTCTGGCACAGTACAAGCCTGAAACCTTCGAATCTCTTGCTTATCAAGGCACAATCAAAAAGCTGGTTTATGATTTGGGATACCCTCGCGAGTTACTAAATTGGTCTTTTAACTGGAAGTACATGGTCAGGGGCTTGGTTCTTGACAAAAAAAGAGGCAACATATTGAAGATGGATCGCCACAAGTATGTGAAAGTAGCCTATCATGGATTTAGAGAGTTATCAAAAGAAGATAAAGTTGGGACCTATGGAAATACTTTAGTACGTGATTCTTTTGATGAGCCAGACTATGCTCTAATTGATACACTCTTTTCACTTGCGGAAGCCTACTTGTTTGCTCAACTGGTTGATTTTAAGGATTGCAATCCTGACAAGATTCAGGAGGGTGTTGATTATGCTCGCATGTACAAAGATGTTCGAGCTGCAGTTGACTTGTGCCACCGTGATGGAACATTGAAGCAAATGGTTGCTATAGAACCAAAGCGGTATATTAATGAAGACTCCTCAATAGTGCCCATGCTTGAAATGCTCAGAGACTCTGGACAAGCAACGTTTTTAGTGACAAATAGTTTATGGGACTATACAAACATTGTCATGAATTTCCTCTGTGGATCCAGTATGGCAGATGTCAGTAACAATTTCGGCTGGCTTCAATACTTTGATGTTGTTATCACTGGCAGTGCAAAGCCAGGATTTTTTCATGAGGAAAATCGTGCCACCCTATTTGAGGTTGTGCCTGAGACTGGAATGCTACTCAATACAGATAATGGCTCTCCTATACCCCAGGTGGGTAATACCTCAGCAAGGCTATTCACAGAAGCAAAGAATCATGCTTGTCCAGTTTTCCAGGGAGGCAATGTTTCTCATCTGCATAAACTGCTTTCCATTGAATCAAGTTCACAGGTTCTCTATGTTGGGGATCACATTTATGGAGATATACTACGCAGCAAAAAGGTTCTTGGATGGAGAACAATGCTTGTAATCCCAGAGCTGGAGAAGGAGGTTAAACTACTCTGGGAATCTAGGGATACCCGCAAGGAACTTCAATTCTTGAGGAGTGAGCGTGACTGCATTGAGGATGAAATACATCATTTGAAATGGTCTCTCAAATTCAAGAATCCAGATGCTGATTCCAAGCAGAAGTTATCTTCTGAACTTGATAAATTAAAGCTTGAAAGAGAGAGAGTGCGATTAAGTCATCAAGAAGCTCAGAAAAAATTACATCAAAGGTTTCACGAGCCATGGGGACAGCTTATGAAAACTGGTTATCAGAATTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCTTGCCTTTATACTAGTCAAGTATCTAACCTGGGCTTATACTCTCCAGACAAGTATTACAGACCTAGTGAAGATTTCATGCAACATGAATTTGGCATTATGGCTTGTGAGACGCCAGACATTTAA 1797 0.419 MRFPKRHFSFSLSNFSPPLPPLFSPRLLFVSGIGAKPPRSLANATSPGVNPLLHAQYSMDGNHEIDVHDSRLRDLPGRDGSKQPRVWSSPENGVKTEIGKQIFCNRSLNMKNIIAVGFDMDYTLAQYKPETFESLAYQGTIKKLVYDLGYPRELLNWSFNWKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFRELSKEDKVGTYGNTLVRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDCNPDKIQEGVDYARMYKDVRAAVDLCHRDGTLKQMVAIEPKRYINEDSSIVPMLEMLRDSGQATFLVTNSLWDYTNIVMNFLCGSSMADVSNNFGWLQYFDVVITGSAKPGFFHEENRATLFEVVPETGMLLNTDNGSPIPQVGNTSARLFTEAKNHACPVFQGGNVSHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVIPELEKEVKLLWESRDTRKELQFLRSERDCIEDEIHHLKWSLKFKNPDADSKQKLSSELDKLKLERERVRLSHQEAQKKLHQRFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLGLYSPDKYYRPSEDFMQHEFGIMACETPDI 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00301 598 Coils Coil 463 483 - -
Gma04g00301 598 CDD HAD_cN-II 103 474 - -
Gma04g00301 598 Coils Coil 501 528 - -
Gma04g00301 598 PIRSF NT5C2 82 596 IPR016695 -
Gma04g00301 598 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 44 591 - -
Gma04g00301 598 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 44 591 IPR008380 -
Gma04g00301 598 Pfam 5' nucleotidase family 102 588 IPR008380 -
Gma04g00301 598 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 102 470 IPR008380 -
Gma04g00301 598 SUPERFAMILY HAD-like 100 589 IPR036412 -
Gma04g00301 598 Gene3D - 98 147 IPR023214 -
Gma04g00301 598 Gene3D - 264 478 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00301 Gma-Chr4 2582898 2589268 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00301 - - gmx:100796383 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00301 04 2582898 2589268 Gma04g00301 04 2582898 2589268 ECH
Gma04g00301 04 2582898 2589268 Gma06g00287 06 2508011 2514136 GST