Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00295 ATGCTAGGAGTCTACAGAATACTGCGACTTCGCCAAAACCCTCAAAGGGGCGCAATATTTCAACAATTCCAAGGGAAGGGAATCCTTAACCTAAACAAAATATATTCAAAATTTGGATGTGCCACGTCCTCTCCACGCATGCAGCAGAAAGGATTGGAGAATGTCACAGTGTCAGAGGTACTAATGACAAAAGGGGAAGCAAATGTTGGTTCCTGGCTCTGGTGCCGAGTTGATGATGCTGTTATCAACGCAATGAAGAACATGGCTGATAATAACATTGGATCATTGGTGGTACTAAAGCCAGAGGGGCAGCATATAGCAGGCATTATCACAGAAAGAGACTGCTTGAAAAAAATAGTTGCACAAGGAAGATCTCCCTTGCACACACATGTTGGTCAAATAATGACTGATGAGAATAACCTGATAACGGTGACCTCCAACACCAACATTCTTCAAGCAATGAAAATTATGACAGAGAATCATATCCGGCATGTTCCTGTTATAGATGGAAAAATAGTTGGCATGATTTCCATTGTAGATGTGGTGCGAGCAGTGATGGAGCAGCAGAGTGGAGAACTGAAGCGACTCAATGACTACGTCAGAGGAGAATACTATTAG 618 0.4272 MLGVYRILRLRQNPQRGAIFQQFQGKGILNLNKIYSKFGCATSSPRMQQKGLENVTVSEVLMTKGEANVGSWLWCRVDDAVINAMKNMADNNIGSLVVLKPEGQHIAGIITERDCLKKIVAQGRSPLHTHVGQIMTDENNLITVTSNTNILQAMKIMTENHIRHVPVIDGKIVGMISIVDVVRAVMEQQSGELKRLNDYVRGEYY 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00295 205 Pfam CBS domain 73 120 IPR000644 -
Gma04g00295 205 Pfam CBS domain 131 186 IPR000644 -
Gma04g00295 205 ProSiteProfiles CBS domain profile. 62 127 IPR000644 -
Gma04g00295 205 SMART cbs_1 71 120 IPR000644 -
Gma04g00295 205 SMART cbs_1 140 186 IPR000644 -
Gma04g00295 205 ProSiteProfiles CBS domain profile. 135 193 IPR000644 -
Gma04g00295 205 Gene3D - 50 204 IPR046342 -
Gma04g00295 205 PANTHER CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN 1 204 - -
Gma04g00295 205 CDD CBS_pair_bac_euk 75 183 IPR044725 -
Gma04g00295 205 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL 1 204 - -
Gma04g00295 205 SUPERFAMILY CBS-domain pair 53 192 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00295 Gma-Chr4 2542174 2543688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00295 - - gmx:100795329 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00295 04 2542174 2543688 Gma04g00295 04 2542174 2543688 ECH
Gma04g00295 04 2542174 2543688 Gma06g00281 06 2474300 2475333 GST