Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00290 ATGAACATATTTGATAAGGCTCCTGTCGTTGATAAGGATGTATTTGTTGCACCAAGTGCCTCCGTCGTTTGGTATGGGTGTGTCTTGAGAGGACAACTCTCTGGTGCATGTTGCAAAGTCAAATTTAAGTGGGAAGGTGTTGCCTACAATTATTGGGGATATAATGTTATTGTCGGTCATAGTGCTGTTTTACATGGTTGTACCGTTGAGGACGAGGCTTTTGTTGGTATGGGTGCAATACTACTACTTGATGGTGTAATTGTTGAGAAAAATGCCATGGTTGCTGTTGGAGCCCTTGTGAGACAGAATACAAGAATTCCTTCTGGTGAGGTATGGGCAGGCAATCCCGCAAAGTTCCTAAGAAAGCTCACTGATGAAGAGATAGCTTTCATCTCCCAGTCAGCCGCCAATTATACTAACCTTGCACAGGTCCATGCAGCCGAAAATTCAAAGTCCTTTGATGAAATTGAGTTTGAGAAGGTGCTGCTGCGAAAGAAGTTTGCACGTAAAGATGAGGAGTACGACTCTATGCTGGGTGTTGTTCCTGATAATGTCTTACCTGATAAAGCAGAAAAAGCTCTTAAAAAATGA 591 0.4264 MNIFDKAPVVDKDVFVAPSASVVWYGCVLRGQLSGACCKVKFKWEGVAYNYWGYNVIVGHSAVLHGCTVEDEAFVGMGAILLLDGVIVEKNAMVAVGALVRQNTRIPSGEVWAGNPAKFLRKLTDEEIAFISQSAANYTNLAQVHAAENSKSFDEIEFEKVLLRKKFARKDEEYDSMLGVVPDNVLPDKAEKALKK 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00290 196 Gene3D Hexapeptide repeat proteins 1 154 - -
Gma04g00290 196 CDD LbH_gamma_CA_like 9 143 - -
Gma04g00290 196 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Gma04g00290 196 PANTHER DYNACTIN SUBUNIT P25 1 193 - -
Gma04g00290 196 SUPERFAMILY Trimeric LpxA-like enzymes 3 144 IPR011004 -
Gma04g00290 196 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00290 Gma-Chr4 2525137 2527095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00290 45 127 Miscellaneous Gene Families AT2G17640 32.039 4.83e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00290 K01726 - gmx:100777972 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00290 04 2525137 2527095 Gma04g00290 04 2525137 2527095 ECH
Gma04g00290 04 2525137 2527095 Gma06g00275 06 2448999 2450087 GST