Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00252 ATGGGTACTTGTGTGGTCAAGAAAGAAATCAGTTTGGAGCGACCAGGCATCTCAGGCACCTCAATTCGGCCTGATGGAAAAATTGCTGCAACTGCTGGCTGGGACCACAGGTTGAGGATATATAATTACCGCAAAGGAAATGCTTTAGCTATTTTAAAGTATCACCATTGCACGTGCAATGCTGTAACTTATTCGTCCGATTGTAAACTTATGGCCTCTGCATCGGAAGACACAACCGTGGGACTATGGGAATTACACATCTGTCAGGCTGGTGCGAGCATAAATTTGAAATATAAGATGCTTAGGCCAATTTGGGAAGAAGGTAGTGGGAAATGTGACCCTTTACAGTATGGTTTTGCTATGGCACCGAAGGATAGAGACCTAATTAAGCCAGCTTTTGTAATGGCAACGCACGCCACAAAACAAGAACATGCATTTGCTATGCCGTCAGAATTCAAGGGTGTCATCTCTGATTAA 477 0.4382 MGTCVVKKEISLERPGISGTSIRPDGKIAATAGWDHRLRIYNYRKGNALAILKYHHCTCNAVTYSSDCKLMASASEDTTVGLWELHICQAGASINLKYKMLRPIWEEGSGKCDPLQYGFAMAPKDRDLIKPAFVMATHATKQEHAFAMPSEFKGVISD 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00252 158 ProSiteProfiles Trp-Asp (WD) repeats profile. 52 85 IPR001680 GO:0005515
Gma04g00252 158 Gene3D - 2 103 IPR015943 GO:0005515
Gma04g00252 158 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 52 85 - -
Gma04g00252 158 ProSitePatterns Trp-Asp (WD) repeats signature. 71 85 IPR019775 -
Gma04g00252 158 SMART WD40_4 45 84 IPR001680 GO:0005515
Gma04g00252 158 SMART WD40_4 3 42 IPR001680 GO:0005515
Gma04g00252 158 Pfam WD domain, G-beta repeat 21 42 IPR001680 GO:0005515
Gma04g00252 158 Pfam WD domain, G-beta repeat 49 83 IPR001680 GO:0005515
Gma04g00252 158 PANTHER - 2 92 - -
Gma04g00252 158 PANTHER TRANSDUCIN BETA-LIKE 3 2 92 - -
Gma04g00252 158 SUPERFAMILY WD40 repeat-like 18 85 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00252 Gma-Chr4 2176299 2180739 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00252 K24770 - gmx:102660947 179.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00252 04 2176299 2180739 Gma04g00252 04 2176299 2180739 ECH