Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00236 ATGGGAGAAAAATCGAGGTCCAAAGGAGGGTGCTGCGGTTGGTTTATCGCGTTTATCATTCTGGCTCTCGTCGTCGGTGCCATTGTTTTTACCGTTAAGAAGAAATTTAGTCACTCCGGTTCCGATAAGCCTGCTCCGGTTCCCGGTCCCCCTGGCGCCGTTGACCAAAAATATTCCACTGCACTCAAAACTGCGATGCAATTCTTCGATATTCAGAAATCTGGGAAGTTAGTTGACAACAAAATATCTTGGAGAGGGAATTCGGCTCTTAAGGATGGGAGCCAAGCGAAGTTGGATCTAACAAAAGGGATGTACGATGCTGGGGATAACATGAAGTTTGGTTTTCCCATGGCTTTTACGGCGACGGTGCTGTCGTGGTCCATTCTGGAATATGGAGATCAGATGGATCACGTTGGCCAGTTAGACGCTGCGCAAGATTCGCTCAAGTGGATCACTGATTATCTCATCAATGCTCACCCTTCTGAGAATGTTCTCTATATTCAGGTGGGTGATCCTGTTGCAGATCACAAGTGTTGGGAAAAACCAGAAGCCATTACTGAGGAACGACCACTCATACAAGTGAATGCATCTTGTCCTGGATCAGACGTTGCAGCTGAAACTGCAGCAGCCATGGCCTCAGCATCTTTGGTCTTTAAAAAGACTGATCCTACATATTCAAGCACTCTACTCAAGCATGCAAAACAGTTGTTTACTTTTGCTGACAAGAATAGAGGTTCCTATAGTGAGAATATACCCGAAGTCCAGACATATTATAACTCAACTGGATATGGTGATGAGCTTTTATGGGCAGCTAGTTGGCTCTATCATGCTACGGGTGATGATTCTTACCTTCAGTTTGTGACTGGCCAAGATGGAGAAGACTATGCTCAATGGGGAAGCCCAACCTGGTTCAGTTGGGATAACAAGCTTGCTGGAACTCAGGTTTTGTTATCTAGATTAAGCTTTTTTAAGGCAAAGGACATTTCGAATTCATATAGCTCTGGGCTCCATAGTTACAGGAAAACTGCTGAGGCTGTAATGTGTGGTCTTCTTCCGGATTCTCCAACAGCCACAAAAAGCAGAACAGATGGGTATTCTACATTAATTGGGTCTTTTTGCTTAACCAAACCCTTCAACAATGGTAGAATGGTATACAAACTGTCAAGCCTTTCTCTCATTTCTCCAAAATCTCTGCGAACATCTTGGATTGCATCTTCCATTTCTCGCATATATTCATTGTGGTGA 1245 0.4418 MGEKSRSKGGCCGWFIAFIILALVVGAIVFTVKKKFSHSGSDKPAPVPGPPGAVDQKYSTALKTAMQFFDIQKSGKLVDNKISWRGNSALKDGSQAKLDLTKGMYDAGDNMKFGFPMAFTATVLSWSILEYGDQMDHVGQLDAAQDSLKWITDYLINAHPSENVLYIQVGDPVADHKCWEKPEAITEERPLIQVNASCPGSDVAAETAAAMASASLVFKKTDPTYSSTLLKHAKQLFTFADKNRGSYSENIPEVQTYYNSTGYGDELLWAASWLYHATGDDSYLQFVTGQDGEDYAQWGSPTWFSWDNKLAGTQVLLSRLSFFKAKDISNSYSSGLHSYRKTAEAVMCGLLPDSPTATKSRTDGYSTLIGSFCLTKPFNNGRMVYKLSSLSLISPKSLRTSWIASSISRIYSLW 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00236 414 PANTHER ENDOGLUCANASE 2 11 365 - -
Gma04g00236 414 SUPERFAMILY Six-hairpin glycosidases 56 370 IPR008928 GO:0005975
Gma04g00236 414 Pfam Glycosyl hydrolase family 9 58 361 IPR001701 GO:0004553|GO:0005975
Gma04g00236 414 Gene3D - 55 407 IPR012341 GO:0005975
Gma04g00236 414 PANTHER ENDO-1,4-BETA-GLUCANASE 11 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00236 Gma-Chr4 2017987 2023495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00236 1 364 Glycoside Hydrolase AT1G75680 69.863 1.07e-168 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00236 - - gmx:100820195 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00236 04 2017987 2023495 Gma04g00236 04 2017987 2023495 ECH
Gma04g00236 04 2017987 2023495 Gma06g00218 06 1912147 1917977 GST