Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00229 ATGAAGGGTAGCAAGAGGCCCATCCACGCCGTCACGACATGGGTTCGGCGCCAACCGCCCAAGATAAAGGCCTTTCTCGCGGTGCTGTCTGCCCTTGCGGCCTTGCTCTTCCTCAGAATCGTCGTTCACGACCACGACAGCCTCTTCGTCGCCGCCGAGTTTGTCCATGCATTAGGAATCTCCGTCCTCATTTACAAACTCACCAAGGAAAAAACCTGTGCCGGGCTTTCGCTTAAATCGCAGGAGCTGACGGCTATGTTTCTGGGTGTTAGACTTTATTGCAGTTTTGTGATGGAATATGATATACACACCCTACTCGATATGGCAACCTTGGCCACCACCCTCTGGGTTATTTATATGATACGTTTCAAATTGAAATCTAGTTATATGGATGATAAGGACAACCTTGCAATATACTATGTGGTAATACCTTGTGCTGTGCTGTCCTTGTTAATTCATCCAACAACCCGGCATCATCCACTTAATAGGATTCTCTGGGCATTTTGTGTTTATCTTGAAGCTGTTTCTGTTCTCCCTCAGCTGCGGGTCATGCAGAACACTAAGATTGTTGAACCATTCACAGCACACTATGTTTTTGCTCTTGGAGTTGCAAGGTTCTTGAGTTGTGCACATTGGGTCCTCCAGGTATTAGATACTCGTGGACGTCTACTGACTGCATTGGGTTATGGATTGTGGCCTTCTATGGTTCTTCTATCAGAAATTGTCCAAACTTTCATTCTGGCAGATTTTTGCTACTACTACGTCAAGAGTCTTGTTGGGGGACAACTTGTTCTTCGACTTCCTTCAGGAGTGGTCTAA 819 0.4628 MKGSKRPIHAVTTWVRRQPPKIKAFLAVLSALAALLFLRIVVHDHDSLFVAAEFVHALGISVLIYKLTKEKTCAGLSLKSQELTAMFLGVRLYCSFVMEYDIHTLLDMATLATTLWVIYMIRFKLKSSYMDDKDNLAIYYVVIPCAVLSLLIHPTTRHHPLNRILWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYVKSLVGGQLVLRLPSGVV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00229 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma04g00229 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR-LIKE PROTEIN 1 271 - -
Gma04g00229 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma04g00229 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma04g00229 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma04g00229 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma04g00229 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Gma04g00229 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00229 Gma-Chr4 1964407 1967345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00229 5 272 Miscellaneous Gene Families AT2G21190 81.343 2.14e-169 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00229 - K10949 gmx:100787747 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00229 04 1964407 1967345 Gma04g00229 04 1964407 1967345 ECH