Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00196 ATGGCGAAAGGAAAGCATTCGCATACCCGCGCACAAGGGAAGAAGTGGTCAACGTTCTCGCTGGTTCTGTGGGCGCTTTTCTTCCTCACACTCATCCTCGTCGTGCTCCTTGCTCTCGGCATTGTTTATCTTCCAACCACCGACGACGATTTTCCAACCACGGAGCTCAGCGCCTTCAGGCGCAAGACCTCTCAAAGTGGCGAGAGTTTGGTGGAAAACTCGGAGCAGTGGACCGAGATTCTCTCCTGGGAGCCAAGAGCGTTCATCTATCACAATTTTCTGTCTAAAGAAGAATGTGAGTACTTGATTGAACTTGCCAAACCTCATATGGTAAAATCAAGTGTTGTTGATAGCAAGACTGGGAAGAGTACAGAAAGCAGGGTTCGAACCAGTTCAGGAATGTTCTTGAAGAGAGGAAGGGACAAAATCATCCAGAATATAGAGAAAAGAATTGCTGACTTTACCTTCATACCTGTAGAGAATGGAGAAGGACTTCAAATCCTTCACTATGAAGCAGGACAAAAATATGAGCCTCACTATGATTACTTCCTTGATGAGTTCAACACTAAGAATGGAGGCCAACGTATTGCTACAGTTCTTATGTACCTTTCAGATGTTGAAGAAGGCGGTGAGACTGTATTTCCTGCTGCCAATGCAAATTTTAGTTCTGTGCCTTGGTGGAATGATTTATCCCAATGTGCAAGAAAGGGTCTCTCAGTGAAACCAAAAATGGGTGATGCTCTGCTATTTTGGAGCATGAGGCCTGATGCCACTCTAGATCCATCTAGTTTACATGGCGGTTGCCCAGTAATTAAAGGAAATAAATGGTCTTCAACAAAGTGGCTGCATCTTCATGAGTACAAGGTTTGA 870 0.4471 MAKGKHSHTRAQGKKWSTFSLVLWALFFLTLILVVLLALGIVYLPTTDDDFPTTELSAFRRKTSQSGESLVENSEQWTEILSWEPRAFIYHNFLSKEECEYLIELAKPHMVKSSVVDSKTGKSTESRVRTSSGMFLKRGRDKIIQNIEKRIADFTFIPVENGEGLQILHYEAGQKYEPHYDYFLDEFNTKNGGQRIATVLMYLSDVEEGGETVFPAANANFSSVPWWNDLSQCARKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPVIKGNKWSSTKWLHLHEYKV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00196 289 Pfam 2OG-Fe(II) oxygenase superfamily 165 283 IPR044862 -
Gma04g00196 289 PANTHER PROLYL 4-HYDROXYLASE 3-RELATED 5 289 - -
Gma04g00196 289 Gene3D q2cbj1_9rhob like domain 78 284 - -
Gma04g00196 289 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 5 289 IPR045054 -
Gma04g00196 289 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 161 284 IPR005123 -
Gma04g00196 289 SMART p4hc 85 283 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00196 Gma-Chr4 1668008 1672936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00196 K00472 - gmx:100818586 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00196 04 1668008 1672936 Gma04g00196 04 1668008 1672936 ECH
Gma04g00196 04 1668008 1672936 Gma06g00184 06 1610089 1614342 GST