Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00193 ATGGACCCCCTCTCTCTCTTCTGCACCGGAGCCCTCCTCGCCGGCGGCCTCTACTGGTTCGTGTGCGTTCTGGGCCCCGCCGAGCAGAAGGGCAAACGCGCCACCGATCTTTCCGGCGGCTCCATCTCCGCCGAGAAAGTCCAAGACAACTACAAACAGTACTGGTCCTTCTTCCGCCGCCCAAAGGAGATCGAGACCGCCGACAAAGTCCCCGACTTCGTCGACACCTTCTACAATCTAGTCACAGACATCTACGAGTGGGGGTGGGGCCAGTCCTTCCACTTCTCCCCCTCCATCCCCGGCAAGTCCCACCGCGACGCCACGCGCCTCCACGAGGAGATGGCCGTCGATCTCATCGAGGCCAAGCCCGGCAACAGAATCCTGGATGTGGGCTGTGGCGTGGGCGGTCCCATGCGGGCCATCGCGGCCCACTCGCGGGCCAACGTAGTCGGCATCACCATCAACGAGTACCAGGTCAACCGCGCAAGGATGCACAACAAGAAGGCAGGGTTGGAGTCCCTCTGCGAGGTCGTGTGCGGGAATTTTCTCAAGATGCCCTTCCCCGACAACAGCTTCGACGGCGCGTACTCCATCGAGGCCACGTGTCACGCGCCGAAGCTGGAGGAAGTGTACGCCGAAATCTTCCGTGTTCTGAAACCGGGGGCGCTCTATGTTTCCTACGAGTGGGTGACGACGGATAAGTACCGAGGCGATGACCCTGAACACGTGGAGGTCATTCAGGGGATTGAGAGGGGGGACGCGTTGCCTGGCCTTAGAAACTACACCGACATAGCCGAGACGGCGCGTAAGGTAGGGTTTGCTGTTGTGAAGGAGCGGGATCTGGCTAAGCCGCCGGCTCAGCCATGGTGGAGCCGATTGAAGATGGGTAGGATCGCCTACTGGCGGAACCATATTGTGGTCACTGTTCTCGCCGCTTTGGGAATCGCGCCCAAGGGGACCGTCGATGTTCATGAGATGCTCTTCAAGACCGCTGACTATTTGACCAGAGGGGGTGACTCTGGCATTTTCTCGCCGATGCACATGATCCTCTGCAGAAAGCCCCATGACAAGGACGACCATAACTGA 1086 0.5994 MDPLSLFCTGALLAGGLYWFVCVLGPAEQKGKRATDLSGGSISAEKVQDNYKQYWSFFRRPKEIETADKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIEAKPGNRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARMHNKKAGLESLCEVVCGNFLKMPFPDNSFDGAYSIEATCHAPKLEEVYAEIFRVLKPGALYVSYEWVTTDKYRGDDPEHVEVIQGIERGDALPGLRNYTDIAETARKVGFAVVKERDLAKPPAQPWWSRLKMGRIAYWRNHIVVTVLAALGIAPKGTVDVHEMLFKTADYLTRGGDSGIFSPMHMILCRKPHDKDDHN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00193 361 PANTHER - 1 356 IPR044625 GO:0008168|GO:0032259
Gma04g00193 361 CDD AdoMet_MTases 126 230 - -
Gma04g00193 361 PANTHER 24-METHYLENESTEROL C-METHYLTRANSFERASE 3 1 356 - -
Gma04g00193 361 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Gma04g00193 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 356 IPR029063 -
Gma04g00193 361 Pfam Sterol methyltransferase C-terminal 291 354 IPR013705 GO:0006694|GO:0008168
Gma04g00193 361 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Gma04g00193 361 Gene3D Vaccinia Virus protein VP39 44 309 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00193 Gma-Chr4 1656540 1658068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00193 116 222 Acyl Lipid Metabolism Gene Families AT1G73600 33.645 3.46e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00193 K08242 - gmx:100804517 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00193 04 1656540 1658068 Gma04g00193 04 1656540 1658068 ECH
Gma04g00193 04 1656540 1658068 Gma06g00181 06 1596626 1598150 GST