Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00176 ATGGGCTGCAACACCTCGAGACTTGACCGGCTACCGGCGGTGGCACTGTGCCGTGACCGTTGCAAGTTCTTGGACGACGCGCTTCGCCAAAGCTACGCCCTCGCCGACGCACACGTGGCACACATGGAGGCCCTCAAAACACTTGGCCACGCTCTCCTCTGTTTCTTCGACGGTTTCGAGGATTCCGACGAAACTAATGTCCCAAATAAGGAAACCAAAGTTCCTGTCGCCACGAAATCTCCACCCCCTCACTCCCCTTCTTCCTTTAGTTCGGACTCAGACGACGCACACGTGCTTTTGCATTCCGAATCAGAAACCGAAGACGCAGAAAAAGAAGAGTTCCAATTGTTCACTCACGCGCGTTATGACTACGCTCACTCGGCTCGTTACCCCCCGTTTTCTCCGCCGCGTGGCTATTCCGGCTCGAAGCCGCCGTCTCCGCCGCCTCCTTCCGGCTCCGCCTGGGATTTCCTTAACTTCTTCGAGCCGTACGAGAAGTACCACGTGCCTTATTTTCCTGGCGGCGGTGACGCTGACGTGGCCGAGAATGAAAAGGGGAAGGTTGAGAAACGTGACGGGTCTAAATCTAAGGAGGAAAATGGAGAAGCGAAGAAAAAGAAGGGTGATTCGAAGGAGAAGAAGGTGGTTTCTGAGAAAGCGGAAGTTGTATTAGTTTCAGAGCAATGTAGTGACTCTGCGAAAGGTTTCTCTGAGGCAGTGAAAGAGATTCAGATTCTGTTTGAGAAAGCGTCGGAGTCGGGGAACCCCGTTTTGGAGATGCTGGACGCTGGGAAACTCCGTTACCATCGAAAATTTGACCTCAACCCGGTTTCGTGCAAGATGATGCATGTGTTTACTCCCTCAAGTCCTCTTGGGGTTAGATGCATGAAATCCTCGGTTGGGCGGAGAATGGGATCTGGGTATGAAGGAGACAAGGATCTCACTTACGCCAATCTCTGCTCTACTCTGAAAAAACTATGTATGTGGGAGAAGAAGCTGTATCATGAAGTCAAGGCTGAGGAGAAATTGCGTATGCTTCATCAGAAGAAGTGTAAGCAGTTGAGACGTATGAAACAAAAGGATGCCGATGCACAGAAAATTGATTCTGTTCAAACTTTCATTGGGATTTTATCTACAAAAATGAAAATTTCTATCCAAGTAGTTGACAAGATATCTATTACAATTAGTAAGTTGAGAGAAGAGGAGCTGTGGCCGCTGATCTACAGGTTTATTCTCACGTTTCTCGGAATGTGGAAAGATATGCAAGAATGTTACAAATGCCAATATCAGCAAATTGTTGAAGCCAAAACTTTAGATGCCTTATCGTTAAACACAAAGCCTGGCAATGCTCATATTGATGCAACAATAAAACTCAAATCTGAGGTACAGAAATGGAATTTGAGCTTCTTAGATTGGATTCACGCCCAGAGGTCCCATGTGAAAGCCTTGAATGGTTGGCTGGTAAGATGTCTATTATACGAACCCGAAGAAGTACCCGATGATTCAACTCCCTTCTCACCTAGCAAGATTGGGGCACCACCTGTGTTTGTGATCTGTCACAAATGGTCAAGGGCAGTGGATAATCTCTCAGAGAAGAATGTAATTGAAGCCGTAAATGGGTTCATGCTACGAGTGAACGAGCTCTTGGAAAAGCATATTTTAGACCTTCAACAAAAACTAACATTGGACAAAGAATTTGAGAGAAAGGTGAAAATGTTGGAGAGGGAGGAGCAAAAGATGCACAAAGTGATGCGGGCTCATGAGAGGAAGATGGTTACAGTTGGCAGAGAAGAATCTGATGCACTTTTACGTGGAGATGCTGTGCATCACGCTGATATCGTTGATTCTACTAACCTACAATCAAGTTTGAAGCAGATCTTTGGTGCCATGGAAAAGTTCACAGACTCCACTGTTCGCTTATATGAAGAACTTTGTCAACAAATTAAGCAAGAGGATCATGTTTTGGGAGAAACCAACAAAATTAGCTAG 1989 0.462 MGCNTSRLDRLPAVALCRDRCKFLDDALRQSYALADAHVAHMEALKTLGHALLCFFDGFEDSDETNVPNKETKVPVATKSPPPHSPSSFSSDSDDAHVLLHSESETEDAEKEEFQLFTHARYDYAHSARYPPFSPPRGYSGSKPPSPPPPSGSAWDFLNFFEPYEKYHVPYFPGGGDADVAENEKGKVEKRDGSKSKEENGEAKKKKGDSKEKKVVSEKAEVVLVSEQCSDSAKGFSEAVKEIQILFEKASESGNPVLEMLDAGKLRYHRKFDLNPVSCKMMHVFTPSSPLGVRCMKSSVGRRMGSGYEGDKDLTYANLCSTLKKLCMWEKKLYHEVKAEEKLRMLHQKKCKQLRRMKQKDADAQKIDSVQTFIGILSTKMKISIQVVDKISITISKLREEELWPLIYRFILTFLGMWKDMQECYKCQYQQIVEAKTLDALSLNTKPGNAHIDATIKLKSEVQKWNLSFLDWIHAQRSHVKALNGWLVRCLLYEPEEVPDDSTPFSPSKIGAPPVFVICHKWSRAVDNLSEKNVIEAVNGFMLRVNELLEKHILDLQQKLTLDKEFERKVKMLEREEQKMHKVMRAHERKMVTVGREESDALLRGDAVHHADIVDSTNLQSSLKQIFGAMEKFTDSTVRLYEELCQQIKQEDHVLGETNKIS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00176 662 MobiDBLite consensus disorder prediction 180 213 - -
Gma04g00176 662 PANTHER UNCHARACTERIZED 1 654 - -
Gma04g00176 662 Coils Coil 570 590 - -
Gma04g00176 662 Pfam Protein of unknown function (DUF630) 1 57 IPR006868 -
Gma04g00176 662 MobiDBLite consensus disorder prediction 65 95 - -
Gma04g00176 662 Pfam Protein of unknown function (DUF632) 237 546 IPR006867 -
Gma04g00176 662 MobiDBLite consensus disorder prediction 178 213 - -
Gma04g00176 662 PANTHER F5M15.15 1 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00176 Gma-Chr4 1516125 1519000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00176 1 82 Acyl Lipid Metabolism Gene Families AT2G27090 40.244 6.82e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00176 - - gmx:100815394 1249.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00176 04 1516125 1519000 Gma04g00176 04 1516125 1519000 ECH
Gma04g00176 04 1516125 1519000 Gma06g00167 06 1482856 1486244 GST