Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00155 ATGGGCGAGGTATCTGAAAGTACCATGACGAAGAGGAAGAAGAAGGGACGCCCCTCTCTTTTGGATCTTCAAAAGCGATCTCTCAAAAAAGAACAGCAAAATCACCACCAGCAGCGACACAATTCAACCAACGTTGTTCCCCACGACGACGACGAGGACGAGCGCAAGGAGAAGAAGCACAAGCTCTTGGTTGGTCTCAATTCCCATCTCCACCACCCAACATTATTGCCCAATTCCCAACCCTTCAATTCCGATCCCAAGAGGCGCAAGATTATTGACCCTCTCCAAACGGTGCGTTTCATTATTACAATCACAATGACCTTCTCTCTATTCTCCTGTTCGCAGGGAGAGTCCGGTCCCACTACGCCTTTGCCAGACAAAAAGCTCTTGCTGTTTATCCTTGACAGGCTTCAAAAaaaggacacacatggggtgttctctgagccagtggatccagaagagcttcctgattatcttgacatcattaaacacccgatggattttggaactgtcaggaagaaattggatggggggctatatactgacttggaacattttgagaaagacgtgttcttgatatgctctaatgcaatgcaatataattcctcagataccatttaccatcgacagGCCCGAGCCATGCAAGAGATTGCAAGGAAAGACTTTGAGAATCTTAGACAAGATAGTGATGATGATAGTGAACCACAGCCCAAAATTGTGCAGAGAGGAAGGCCACCAGGCAAGCACTCAAGAAAGTCACTGGGACTGGGTATGCCTCCTCCTGAGCGTGTTGGTCCTGAATCTTCTTCTGATGCAACTCTGGCTTCTGGCGGGGATATTGCTAGTGGTTCCAACGGTTATAATCTAAGAAAAGTACCCAGCAAATTTCAGCCCACAGATTCATCTGCGAGGGCCTACAACAGCACTTTTAACAGTGGAGGGTATGTTGGCTGGTCTGAATGGGAGAATGAATTTCCAGCTTCTGTTGTAAAAGCTGTGCTAAGATATGGAAAGAAGCAGTTTGTGGTTGATGAAACCAGGCGTGATACTTACAAAAATCCAGTGACTTTAGGAAATGAACGACCGGTGTTGTCCACAGTTGAAGATGAATTCAAGCAACTTCTTGCAGTAGGTGTACACATGAAGCATAGCTATGCAAGAAGTCTAGCCCATTTTGCTGCAGACCTTGGTCCTGTTGTTTGGAAGATTGCTGCAAGTAAAATCAGCAGTGTTTTGCCAGCAGGACATGATTTTGGTCCTGGATGGGTAAGTGAAGATGATGGTTCGTCACAGAGGCGACACTTCCCAGTTTGTGATGAGGGTAGAACTTCAGACCCTCCTGTACCAGAGGATTATAGAAGTAGATTTTCTTCTCCATCTGGATCGCTCCCCCTTGCAAATAGACCATTCTATCAAAGTGGAGACATGGCTATAGATAATTACCAAAATGAGTTGAATCCAGTAATCAACATTCCTGGTGGGTCTGAATCCATAACTCCTATGAGGATTCAGCAGGAATCCATGGTGCACTCTGATGATTTTGGTTCATGTGATCGGTTAGGTTCTAATTTCCCATCTCAAATGAAGATGGTAAGACTTGCTGATCTAACTGGGACTTCGAGTGCTGGAGTTGTTCCTCAAATGTTTGACATGGATCCCATAAGCAACCGCATTGTGCATACAAATGTTGATTCTTCTTTTAAGGGTCAGCACTTAAGCAAATTAAGTCAATTAGATTCTGGTAATTTATTGTCACGGGAACCTGGATTTGAGCCACAAAGTTGGCCTCAAGGGCTTGCTGGAAAATCATCTTGGCAGGGATTGGAAGTTCCCACTAAACAGAATTCTTTTGCTCTTGCTAATGACTTAAATGGAAGGATTGGAACTACAAACTCACCCAGTTCCAACGTGGAGGCTGGTTCCCAGTTGCAGCCTAATTTGGCATTACAGCTCTGA 1956 0.4018 MGEVSESTMTKRKKKGRPSLLDLQKRSLKKEQQNHHQQRHNSTNVVPHDDDEDERKEKKHKLLVGLNSHLHHPTLLPNSQPFNSDPKRRKIIDPLQTVRFIITITMTFSLFSCSQGESGPTTPLPDKKLLLFILDRLQKKDTHGVFSEPVDPEELPDYLDIIKHPMDFGTVRKKLDGGLYTDLEHFEKDVFLICSNAMQYNSSDTIYHRQARAMQEIARKDFENLRQDSDDDSEPQPKIVQRGRPPGKHSRKSLGLGMPPPERVGPESSSDATLASGGDIASGSNGYNLRKVPSKFQPTDSSARAYNSTFNSGGYVGWSEWENEFPASVVKAVLRYGKKQFVVDETRRDTYKNPVTLGNERPVLSTVEDEFKQLLAVGVHMKHSYARSLAHFAADLGPVVWKIAASKISSVLPAGHDFGPGWVSEDDGSSQRRHFPVCDEGRTSDPPVPEDYRSRFSSPSGSLPLANRPFYQSGDMAIDNYQNELNPVINIPGGSESITPMRIQQESMVHSDDFGSCDRLGSNFPSQMKMVRLADLTGTSSAGVVPQMFDMDPISNRIVHTNVDSSFKGQHLSKLSQLDSGNLLSREPGFEPQSWPQGLAGKSSWQGLEVPTKQNSFALANDLNGRIGTTNSPSSNVEAGSQLQPNLALQL 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00155 651 SMART bromo_6 119 227 IPR001487 GO:0005515
Gma04g00155 651 PRINTS Bromodomain signature 141 154 IPR001487 GO:0005515
Gma04g00155 651 PRINTS Bromodomain signature 155 171 IPR001487 GO:0005515
Gma04g00155 651 PRINTS Bromodomain signature 171 189 IPR001487 GO:0005515
Gma04g00155 651 PRINTS Bromodomain signature 189 208 IPR001487 GO:0005515
Gma04g00155 651 Gene3D - 124 241 IPR036427 GO:0005515
Gma04g00155 651 ProSiteProfiles Bromodomain profile. 138 208 IPR001487 GO:0005515
Gma04g00155 651 PANTHER BROMODOMAIN CONTAINING PROTEIN 8 439 - -
Gma04g00155 651 PANTHER BROMODOMAIN-CONTAINING PROTEIN-RELATED 8 439 - -
Gma04g00155 651 Pfam Bromodomain 133 212 IPR001487 GO:0005515
Gma04g00155 651 CDD Bromodomain 126 222 - -
Gma04g00155 651 ProSitePatterns Bromodomain signature. 143 200 IPR018359 -
Gma04g00155 651 MobiDBLite consensus disorder prediction 226 301 - -
Gma04g00155 651 MobiDBLite consensus disorder prediction 427 449 - -
Gma04g00155 651 MobiDBLite consensus disorder prediction 269 301 - -
Gma04g00155 651 MobiDBLite consensus disorder prediction 1 58 - -
Gma04g00155 651 MobiDBLite consensus disorder prediction 424 460 - -
Gma04g00155 651 SUPERFAMILY Bromodomain 114 230 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00155 Gma-Chr4 1304320 1308999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00155 K22184 - gmx:100811115 1268.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00155 04 1304320 1308999 Gma04g00155 04 1304320 1308999 ECH