Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00149 ATGGAGCAAGAAATTGGATCTGGGTTCATTGATTGGCTTTGCGAGGAGAGCTTGGGTGCTACTCTGAACGCAAATTTTCAAGATAGCTATGGGTGTTGTATATTTTTTTGTGAAGAAGAATTAGTGAGCATAATGTTTTCTGAAAGATTGGGGGCAGACGAATCTCATTGTCAAGATTTACAGAGTTTGAGTGTGTCAAAGCGACTTGTGAGGAGTGTTAGCCAGAAGTGGAGGAAGAAGAGTAACAGGAATTCTGGGGAAGAAGCTGACGATGTAAATGGAGTTTCTTTAAGATGCTTAAATCTGTATGGACGAGGTGGGGGCTGCAAGGTAGGTGCTGACACTGGTGATGATTTTGGCGATTCAAGCAGTAGAAGGAGATCTAGTGCCAGTGACGAAGGAAAGGGATATAAGCCGATTTGTGGCCCAGAAGAAACTGCTGTGGATTGCTTTTCATATGGGGTGAAGGACAGGTTCTGGAGGAGACACAACCGAAAGAATTCTGAGCTTGAAGAATTGTTTACAAACAATAGAATGCATATTTTTCTTCCTGATGATATTCTTGAAATGTGTTTGGTTAGGCTTCCACTGACAAGTCTCATGAATGCCCGTCTTGTGTGTAAAAAATGGAGGTCGTTGACCACCACGCCTAGGTTCCTCCATATGAGAAGGGAGGGTTCATATCAAAGTCCATGGTTGTTTCTGTTCGGGGTTGTTAAAGATGGATTTTGTTCTGGTGAGATACATGCGCTGGATGTGTCTCTGAATCAATGGCACAGGATAGATGCTCATTTTCTCAGAGGAAGGTTCTTGTTCTCTGTTGCTGGTATACAGGATGATATCTTCATTGTTGGAGGATGTTCGAGCTTGACTAACTTTGGGAAAGTGGATAGGAGCTCATTCAAAACACACAAAGGGGTGCTTGCATTTAGCCCCTTGACAAAATCTTGGCGTAAAATGCCATCCATGAAATATGCTAGATCAAATCCTATATTAGGAATCTCTGAGGTCAGCTTGGATTTTCCAACTTGTCAAAGTCATCAAAGTCGGCAGGATAGACGTTTTCCAAGATCAAGGATTGGTGGGGTTTCAGACGTCTATGAGGATCCTCACAAGCTTTCAATGAGACGTCATTGCAAACCTGCTTTTAATGAGACTGAAGCTTCATCTTTGCCCAGTCGAAAGGCATACAAATTTCTTAGACAAAAAAGTGACCATTCAAGCTCAAAGGGCAGTAAAAGATTTTTGTTGATAGCTGTAGGAGGTCTGGGGTCTTGGGATGAGCCTCTGGACGCTGGGGAAATATATGATTCTGTGTCAAATAAATGGACTGAAATCCCAAGATTACCTTTTGATTTTGGGGTTGCTCGTTCTGGAATTGTTTGTGGCAGGATGTTTTATGTTTATTCTGAAACAGACAAGCTTGCAGCATATGACATAGAACGGGGTTTCTGGATTGCAATTCAAGCCACTCCAATCCCACCTCGTGTACATGGGTACTACCCCAAACTTGTATCTTCTGATGGCCGCCTTTTCATGCTCTCAGTGTCCTGGTGTGAAGGGGATGGTCAGATTGGGAGACGAAACAAGGCTGTTAGAAAATTATGGGAGTTGGATCTCATGTATCTTACCTGGACTGAAGCCTCAGTGCATCCGGATGCCCCAATGGACTGGAACGCTGTTTTTGTGTCAGATAAAAGCCTGATTTTTGGGGTGGAGATGTTCAAAATAATTGGCCGGGTATTGGGTTTTTTCACCGTTTGTGATGTGTCTGATATGGCAAACTGGAACCATATTTCAAGGGATCATGTTACTCATGAGCTGGACGTTTCTTCGTGCTTGACCAAATCTGTGGCAGTGTTACACCTTTGA 1872 0.4316 MEQEIGSGFIDWLCEESLGATLNANFQDSYGCCIFFCEEELVSIMFSERLGADESHCQDLQSLSVSKRLVRSVSQKWRKKSNRNSGEEADDVNGVSLRCLNLYGRGGGCKVGADTGDDFGDSSSRRRSSASDEGKGYKPICGPEETAVDCFSYGVKDRFWRRHNRKNSELEELFTNNRMHIFLPDDILEMCLVRLPLTSLMNARLVCKKWRSLTTTPRFLHMRREGSYQSPWLFLFGVVKDGFCSGEIHALDVSLNQWHRIDAHFLRGRFLFSVAGIQDDIFIVGGCSSLTNFGKVDRSSFKTHKGVLAFSPLTKSWRKMPSMKYARSNPILGISEVSLDFPTCQSHQSRQDRRFPRSRIGGVSDVYEDPHKLSMRRHCKPAFNETEASSLPSRKAYKFLRQKSDHSSSKGSKRFLLIAVGGLGSWDEPLDAGEIYDSVSNKWTEIPRLPFDFGVARSGIVCGRMFYVYSETDKLAAYDIERGFWIAIQATPIPPRVHGYYPKLVSSDGRLFMLSVSWCEGDGQIGRRNKAVRKLWELDLMYLTWTEASVHPDAPMDWNAVFVSDKSLIFGVEMFKIIGRVLGFFTVCDVSDMANWNHISRDHVTHELDVSSCLTKSVAVLHL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00149 623 Pfam F-box domain 183 219 IPR001810 GO:0005515
Gma04g00149 623 ProSiteProfiles F-box domain profile. 177 223 IPR001810 GO:0005515
Gma04g00149 623 SUPERFAMILY Kelch motif 417 571 IPR015915 GO:0005515
Gma04g00149 623 Pfam Kelch motif 269 323 IPR006652 GO:0005515
Gma04g00149 623 Pfam Kelch motif 417 450 IPR006652 GO:0005515
Gma04g00149 623 Gene3D - 386 608 IPR015915 GO:0005515
Gma04g00149 623 Gene3D - 195 336 IPR015915 GO:0005515
Gma04g00149 623 SUPERFAMILY Kelch motif 231 332 IPR015915 GO:0005515
Gma04g00149 623 PANTHER OS09G0555300 PROTEIN 45 623 - -
Gma04g00149 623 MobiDBLite consensus disorder prediction 119 133 - -
Gma04g00149 623 MobiDBLite consensus disorder prediction 119 138 - -
Gma04g00149 623 PANTHER OS09G0555300 PROTEIN 45 623 - -
Gma04g00149 623 SUPERFAMILY F-box domain 183 244 IPR036047 GO:0005515
Gma04g00149 623 SMART kelc_smart 416 460 IPR006652 GO:0005515
Gma04g00149 623 SMART kelc_smart 280 337 IPR006652 GO:0005515
Gma04g00149 623 SMART fbox_2 183 223 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00149 Gma-Chr4 1265567 1267819 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00149 - - gmx:100813797 1159.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00149 04 1265567 1267819 Gma04g00149 04 1265567 1267819 ECH