Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00142 ATGGCTAGGCGTCATGGATGGGAGCTCCCCTTTCACACTTTTCAGGTCGTGGCTATAACAGTATTTTTCTTGCTATCTATAGCATATTATGCTTTCTTTGCTCCTTTTCTTGGAAAGGACATCTATGAATATTTGGCTATTGGTGTTTACTCTGTATTGGCTCTCTCCGTGTTCTTTCTTTATGTTCGATGCACTGCCATTGATCCTGCTGATAAGGGAGTCATGGTTGATTGTGACAAGACATCAAAGAATAGATCAAAACTTGATGAAGAGTTGGCAGAACCCAGCAAGATGGGACTAAAGGGTGATGGAATGTCTGATCGGCACAATTCAAATTGGTGCTCTAAAGTTGGATGTTTCTTCTGTGGTTTCCTTGTTAGAGAAGATTGCTGTAGTAATGAAGAAATTAGTCTACAGCAACAGTCTGGGGAAGAGGAGGCTTTGTTCTGCACTTTGTGCAATGCTGAGGTGCAGAAGTTTAGTAAGCATTGTCGAAGTTGTGACAAATGTGTTGATGGATTTGATCACCATTGTCGGTGGTTGAACAATTGTGTTGGaaagaagaattacatcacgtttgtgtgtcttatggcagtgagcctagtttggcttatagttgaatgtggagttgggattgcagtacttgtcagatgtttcgttgataagaaaggtacagagaatcagatagctgaaaaacttggagctggtttctctcgagtcccatttgctattattgtggccatatgcacagcagtttcattccttgcaactgtacctttgggagaattattctttttccatatgatcctgatacgaaagggtatcacaacttacgagtatgttGTTGCCATGAGAACTCTAAGTGAACCACCTGGGCCTTCAGTTGATGGGGGTGAACAGCAGAGTCTACCATCGTCTCCTACTAGTTCAGCTGTCACTGCAATGAGTGGAAGAAGCTCCGTTGGAATGAGTATACAGTACAAAGGTGCCTGGTGTACACCGCCAAGGATCTTTATGGACCACCCGGATGAAATTATACCACATTTGGAGCCGGGACGCCTACCATCCACTGTTGATCCAGATGCCGTACAACCACCTGACAAAGGGAGAAAAATGAACCAGCGCCCTGTGCGTATAAGTGCATGGAAACTTGCAAAATTGGATTCTAATGAGGCAACTAAGGCAGCTGCTAAGGCCAGAGCATCATCGTCTGTGCTTCGTCCAATTAGTTCTCGACCTCATGCGTATGATGTTGATCATGTATCCAGTAGCAATGTGAGTGGAAGAAGCAGCCCAATCAGCAATCAAGGATTTCATATAAAAAATGATACAGTGGGGACATCAAGGTTATCTCCTTCCAAGAGCTCGTACCCTCCTAGTCAAGCAAGCAAGGATGACATAGATGCATCATGCCAACACAGTATGAGTAACTTTAGCAGTCCACGAGTCTCCAACCTTACTCCTTCACCAATGCAGAGGCCAGGTTTGAACAGAGACCATTTCAACCCCATGTATCAACAACCATCGGGAAACCAGTCTCCTTCGTCAGCTAAAGGAAGTGAAGGGAACATAAATCCAGTTCACGACAATGTGCCACGTGTACCAATGAGAAGCAACACCTTAGCTGTTTCAGATAATAGAAGATCGTCAGTGTTTTGGGATCAAGCAGCTGGACGCTTTGTCTCGTCCTCATCAAGAGGTCCCGGAACAGAATTATTGTACACGGGCCGTTCTATATTTTTTGGCAGCCCCGTTGTGAATGAACAGCCAAGTACAGGAACAAGAAGTAGCAGTTCAGTAGTAGCTGGTATTCCGGATAGAGATTCTTCTACATTAAGGGATTTTCAGCAAGGTAGATCACATAGGGGTGGCCAGCTTCCTGTGTTTGTTCCTGGTTGTGGTTATGCCCAGCAAAACAAGTTTCCTTAG 1929 0.3821 MARRHGWELPFHTFQVVAITVFFLLSIAYYAFFAPFLGKDIYEYLAIGVYSVLALSVFFLYVRCTAIDPADKGVMVDCDKTSKNRSKLDEELAEPSKMGLKGDGMSDRHNSNWCSKVGCFFCGFLVREDCCSNEEISLQQQSGEEEALFCTLCNAEVQKFSKHCRSCDKCVDGFDHHCRWLNNCVGKKNYITFVCLMAVSLVWLIVECGVGIAVLVRCFVDKKGTENQIAEKLGAGFSRVPFAIIVAICTAVSFLATVPLGELFFFHMILIRKGITTYEYVVAMRTLSEPPGPSVDGGEQQSLPSSPTSSAVTAMSGRSSVGMSIQYKGAWCTPPRIFMDHPDEIIPHLEPGRLPSTVDPDAVQPPDKGRKMNQRPVRISAWKLAKLDSNEATKAAAKARASSSVLRPISSRPHAYDVDHVSSSNVSGRSSPISNQGFHIKNDTVGTSRLSPSKSSYPPSQASKDDIDASCQHSMSNFSSPRVSNLTPSPMQRPGLNRDHFNPMYQQPSGNQSPSSAKGSEGNINPVHDNVPRVPMRSNTLAVSDNRRSSVFWDQAAGRFVSSSSRGPGTELLYTGRSIFFGSPVVNEQPSTGTRSSSSVVAGIPDRDSSTLRDFQQGRSHRGGQLPVFVPGCGYAQQNKFP 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00142 642 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 9 487 - -
Gma04g00142 642 MobiDBLite consensus disorder prediction 415 534 - -
Gma04g00142 642 ProSiteProfiles DHHC domain profile. 148 198 - -
Gma04g00142 642 MobiDBLite consensus disorder prediction 502 523 - -
Gma04g00142 642 PANTHER PROTEIN S-ACYLTRANSFERASE 21 9 487 - -
Gma04g00142 642 MobiDBLite consensus disorder prediction 349 374 - -
Gma04g00142 642 MobiDBLite consensus disorder prediction 298 315 - -
Gma04g00142 642 MobiDBLite consensus disorder prediction 588 626 - -
Gma04g00142 642 MobiDBLite consensus disorder prediction 417 492 - -
Gma04g00142 642 MobiDBLite consensus disorder prediction 588 605 - -
Gma04g00142 642 MobiDBLite consensus disorder prediction 291 315 - -
Gma04g00142 642 Pfam DHHC palmitoyltransferase 145 282 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00142 Gma-Chr4 1208532 1214473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00142 149 279 Lipid Metabolism Gene Families AT4G22750 28.244 9.74e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00142 K20027 - gmx:100798857 1300.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00142 04 1208532 1214473 Gma04g00142 04 1208532 1214473 ECH
Gma04g00142 04 1208532 1214473 Gma06g00135 06 1173601 1179730 GST