Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00076 ATGGCACCTCCCAATTTCAGAGCCTATTCTATTATTCTTATTCTTCTTTTCGTCAATTCAGGAAGCGCCCACAATTACCAGGAGGCATTGTCCAAGGCAATCCTATTCTTCGAGGGCCAACGTTCGGGTTTCTTGCCGCAAGACCAGAGACAGAACTGGCGCGCCAATTCGGGCCTCGGCGACGGCTGGACCTACAACGTCGACCTCACCGGCGGCTACTACGACGCCGGCGACAACATCAAATTCGGGTTTCCGATGGCATTCACCACCACAATGCTGTCCTGGAGCGTCATCGAATTCGGAGACATGATGCCTCCCAACGAGCACCGGAACGCCTTGGTCGCAATCCGTTGGGCAACCGATTATTTGCTCAAAACTGTTTCTCAGCCAAACCGCATTTTCGTTCAGGTGGGTGATCCAATCTCTGACCACAATTGTTGGGAAAGGCCTGAGGACATGGACACAAGCAGGACAGTGTATGCTGTTGATGCACCAAACCCAGCTTCAGATGTAGCTGGTGAAACTGCTGCGGCACTAGCTGCTGCATCAATGGCTTTTCGTTCATCGGATCCTGGTTATTCAGACACTTTGCTTCGAAATGCTGCTAAGGCCTTTCAATTTGCAGATACCTATAGGGGTGCCTACAGTGACAATGCTGATGTTAGGAGTGGTGTTTGCCCATATTATTGTGACTTCGATGGTTATCAGGACGAATTGTTATGGGGAGCCGCATGGCTAAGGAGGGCCACTCAGGATGAAAATTTCCTCAACTACATTCAAAGCAATGGTAAAACCCTTGGTGCTGAAGACAATATAAATGAGTTTGGTTGGGACAACAAACATGCTGGCCTTAATGTTCTTGTCTCCAAGGAAGTTCTAGATGGAAACGTAATGTCTCTTGAATCCTACAAGACTTCAGCAGAGAGCTTTCTGTGCACACTCATACCCGAAACATCAAGTTCACATATAGAGTACACTCCCGGTGGACTCATATACAGGCCTGGGGGCAGCAACTTGCAACATGCAACTTCAATTGCTTTCCTTGAATTGGTTTACGCCAATTACCTATCTCGCACTTCGCAAACCATAAATTGTGGGAACATCTATGTTAACGCACAAACACTTCGCCAGCATGCTAAGAAGCAAGTTGATTACATTTTGGGAGATAACCCAATGCGTATGTCCTACATGGTTGGCTACAGCAACAAGTATCCGCAACATATTCACCATCGTGGCTCCTCTTTACCCTCTATTAAGGACCATCCTCAGTTCATTGCCTGCAAAGAAGGCTCAATCTACTTCAACTCAAGCAATCCTAATCCTAATGTTCTCGTGGGAGCCATTGTGGGAGGACCCGGAGAAGATGATGTGTATGAGGATGATAGGGCTGATTTTAGGAAGTCCGAACCAACCACATACATTAATGCACCATTTGTTGGGATTTTAGCATACTTTGTTGCCAATCCCAACCCTTGA 1476 0.4715 MAPPNFRAYSIILILLFVNSGSAHNYQEALSKAILFFEGQRSGFLPQDQRQNWRANSGLGDGWTYNVDLTGGYYDAGDNIKFGFPMAFTTTMLSWSVIEFGDMMPPNEHRNALVAIRWATDYLLKTVSQPNRIFVQVGDPISDHNCWERPEDMDTSRTVYAVDAPNPASDVAGETAAALAAASMAFRSSDPGYSDTLLRNAAKAFQFADTYRGAYSDNADVRSGVCPYYCDFDGYQDELLWGAAWLRRATQDENFLNYIQSNGKTLGAEDNINEFGWDNKHAGLNVLVSKEVLDGNVMSLESYKTSAESFLCTLIPETSSSHIEYTPGGLIYRPGGSNLQHATSIAFLELVYANYLSRTSQTINCGNIYVNAQTLRQHAKKQVDYILGDNPMRMSYMVGYSNKYPQHIHHRGSSLPSIKDHPQFIACKEGSIYFNSSNPNPNVLVGAIVGGPGEDDVYEDDRADFRKSEPTTYINAPFVGILAYFVANPNP 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00076 491 Pfam Glycosyl hydrolase family 9 26 482 IPR001701 GO:0004553|GO:0005975
Gma04g00076 491 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 385 411 IPR018221 -
Gma04g00076 491 Gene3D - 22 489 IPR012341 GO:0005975
Gma04g00076 491 PANTHER ENDO-1,4-BETA-GLUCANASE 13 490 - -
Gma04g00076 491 PANTHER ENDOGLUCANASE 24 13 490 - -
Gma04g00076 491 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 458 476 IPR033126 -
Gma04g00076 491 SUPERFAMILY Six-hairpin glycosidases 10 487 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00076 Gma-Chr4 655098 658788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00076 9 488 Glycoside Hydrolase AT1G70710 59.711 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00076 K01179 - gmx:100799911 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00076 04 655098 658788 Gma04g00076 04 655098 658788 ECH
Gma04g00076 04 655098 658788 Gma06g00069 06 635366 639086 GST