Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00075 ATGGCCTCTGCTTCTGCTACTCTTCTCAAGTCATCTCCTGTTCTTGACAAGTGCGAGTGGGTCAAAGGCCAGACCCTTCGCCAACCTCTCGTGAGATGTAACCCTTCCTCAGCATCAGCTCTCACCATCAAAGCTGCTTCCTATGCTGACGAGCTCGTCAAAACCGCCAAAACAGTGgcctcaccggggcgtggtattttggcgatggatgagtcaaatgcaacctgcgggaagcgtttggcatctattgggttagagaacacagaagctaatcggcaggcataccgtaccctacttgtgacagtacctggtcttggtgaatacatctctggtgccattctctttgaggaaactctctaccaatccactgtcgatggaaggaagatcgtcgacgtacttgttgaccaaaacattgttcccggtatcaaggTCGACAAGGGTTTGGTGCCCCTAGCTGGTTCGAACGATGAGTCATGGTGCCAAGGTCTTGATGGTCTTGCGTCTCGCTCAGCTGCATACTACCAGCAAGGTGCCCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAACGGTCCCTCTGCTCTGGCAGTGAAGGAAGCTGCCTGGGGTCTAGCTCGCTATGCTGCAATTTCACAGGAGAACGGGTTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGTGAGCATGGGATTGACAGGACATTCGAAGTAGCCCAAAAGGTGTGGTCAGAGGTATTCTTCTACCTGGCTGAGAACAATGTCCTGTTGGAAGGTATTCTCCTCAAGCCTAGCATGGTTACTCCAGGAGCCGAGTCCAAGGACAAGGCCACTCCTCTGCAAGTTGCTGATTACACCCTCAAGCTCCTTCACAGGAGAATCCCACCTGCTGTCCCTGGAATCATGTTTCTGTCTGGCGGACAATCTGAGGTTGAAGCAACCTTGAACTTGAATGCTATGAACCAGTCTCCAAACCCATGGCACGTGTCCTTCTCCTACGCCAGAGCTCTCCAAAACACCTGCTTGAAGACATGGGGTGGACTCCCTGAGAACGTGAAGGCTGCTCAAGATGCACTCCTTTTCCGTGCCAAGTCCAACTCACTCGCTCAGCTTGGAAAGTACACTGCCGAGGGTGAATCTGAGGAAGCCACTCGGGGAATGTTCGTCAAAGGTTACTCCTACTAA 1188 0.4133 MASASATLLKSSPVLDKCEWVKGQTLRQPLVRCNPSSASALTIKAASYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTVPGLGEYISGAILFEETLYQSTVDGRKIVDVLVDQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQENGLVPIVEPEILLDGEHGIDRTFEVAQKVWSEVFFYLAENNVLLEGILLKPSMVTPGAESKDKATPLQVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWGGLPENVKAAQDALLFRAKSNSLAQLGKYTAEGESEEATRGMFVKGYSY 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00075 395 Gene3D Aldolase class I 31 394 IPR013785 -
Gma04g00075 395 CDD FBP_aldolase_I_a 49 375 - -
Gma04g00075 395 Pfam Fructose-bisphosphate aldolase class-I 51 395 IPR000741 GO:0004332|GO:0006096
Gma04g00075 395 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 37 395 - -
Gma04g00075 395 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 37 395 IPR000741 GO:0004332|GO:0006096
Gma04g00075 395 SUPERFAMILY Aldolase 43 395 - -
Gma04g00075 395 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 256 266 IPR029768 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00075 Gma-Chr4 647904 650022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00075 39 395 Miscellaneous Gene Families AT3G52930 54.848 4.41e-132 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00075 K01623 - gmx:100798677 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00075 04 647904 650022 Gma04g00075 04 647904 650022 ECH