Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00008 ATGGTGCCAACCTCTGTTGGAAGCTCTTCATTTTTAAAGGATAAGGATCCTGGTACTGATTCTAATAGAGTTTCTGGCACCAAGAGACCCTTGTCTGACTACCCATTGAATCACCAGCTCCAACAATCTCCAAGCAATAATGCTGCAAATGGACATCTTGTGTATGTCCGTAGAAAATCAGAAGCAGAATTGAGCAAGGGCATTGCTTATGAAAATCCAAGTATTAATGCTTATTGTTCACATTCTAGGCAACTTTGTTGTGAAGAGGAGACTGCTCAACCAAAATCTCAGATAAAGGAGCCACCTCAGTTAAAGGAACCTAAGGCTTCTTGCTTCCCAGCATTTGCACCTTTTCCTATGGCTTCTTCAATGAACTCATCTGGAAAGCCTTCAGTTCCTATTTCTCTTGGGAAATCTGCCAAGAAATTAGCACCAGTTGAGTCCAATTATGTGACAGCTTCTTCTGGCCCAACTACTATTGGTAATCCAAAGGGATTAAAAAATTTGCACTGGGACGAGCGATACCAACAATTGCAGATGTTTTTGAGGAAATTGGACCAATCAGATCGAGAGGAATATATCCAAATGCTTCACTCCCTGTCCTCAGTTGAACTTAGCAAACATGCTGTTGAGTTAGAGAAGAGATCAATTCAGCTTTCGTTAGAGGAAGCTAAAGAATTGCAGCGTGTTGCTGTTTTAAATGTCTTGGGTAAATCAGTGAAAAACTTCAAAGCACCCGCAGATTATGACGAATGTTCAGACAAGTTGAAGACATTATCATGA 783 0.4074 MVPTSVGSSSFLKDKDPGTDSNRVSGTKRPLSDYPLNHQLQQSPSNNAANGHLVYVRRKSEAELSKGIAYENPSINAYCSHSRQLCCEEETAQPKSQIKEPPQLKEPKASCFPAFAPFPMASSMNSSGKPSVPISLGKSAKKLAPVESNYVTASSGPTTIGNPKGLKNLHWDERYQQLQMFLRKLDQSDREEYIQMLHSLSSVELSKHAVELEKRSIQLSLEEAKELQRVAVLNVLGKSVKNFKAPADYDECSDKLKTLS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00008 260 Pfam Retinal tissue protein 177 236 IPR018737 GO:0006355|GO:0070176
Gma04g00008 260 PANTHER INTEGRAL MEMBRANE HEMOLYSIN-III-LIKE PROTEIN 1 243 - -
Gma04g00008 260 MobiDBLite consensus disorder prediction 1 15 - -
Gma04g00008 260 MobiDBLite consensus disorder prediction 23 50 - -
Gma04g00008 260 PANTHER INTEGRAL MEMBRANE HEMOLYSIN-III-LIKE PROTEIN 1 243 - -
Gma04g00008 260 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00008 Gma-Chr4 95232 96575 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00008 - - gmx:100802245 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00008 04 95232 96575 Gma04g00008 04 95232 96575 ECH