Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02129 ATGATAGGAGAAGCTAACTTTTTGGGAGGTGTTGCTTCAGTTAAGGGAATTAAAGGATTTGACACAGAAGCTGCAAAAACAAGGTTTTTTGAAATTTATTTGGATAAGTGTAAAAGCAAAGGCCTTAAAGTGGCTGTTGCATCTAGTGCTGATCGTATAAAGGTTGATGCCAATCTAGCTGCTGCTGGTTTACCATTATCCATgttcgatgcaattgtgtctgcagatgcttttgagaatttgaaacctgctcctgatattttcttagctgcatcaagaatattgaatgtgccccccaatgagTGTATTGTTATAGAAGATGCGCTAGCTGGATTGCAAGCTGCCAAAGCTGCACAAATGAGATGCATAGCTGTAAGGACCACATTATCAGATGAGAATCTAGAACCAGCTGGCCCGACACTTATCCGAGATAACATAGGAAGTGTTTCGCTTGATGATATTCTCAGTGGTGGCTCTGTTGGATATAATAAGAGGATGCAGGGCTCTGAAACACTAAATAATTTTGCAGAGTCTTCATCTACTGTGCTTGCTGGAGGGTTGCAGGGTTCTCGGCAAGATATACTGAGATTTGGAAGTCTGGGAATTGCTATCTCTTGCCTTTTCTTCACCATAAGCAACTGGAAGGCAATGCAATATGCTTCCCCTAAAGCAGTTTGGAATCAGTTTTTTGGTGTTACCCAGCCACCCTTGGAGCAGAAAGAAGATAACTCAAGAGATGATAGGATCCAGCAATTTGAGAACTACATATCTGATCTGGAAAGCAGGGGAAATGCTCAGATTGTTCCAGAATTTCCGTCTAAACTAGAATGGCTGAATACGGCTCCACTTCAGTTTCTCAGGGATCTGAAAGGAAAAGTTGTACTGCTGGATTTCTGGACTTATTGTTGTATAAACTGTATGCATGTGTTGCAAGACCTAGATGTTTTGGAGAAAAAATACAAAGATATGGCGTTCGTTGTTGTGGGTGTTCATTCTGCAAAGTTTGATAATGAGAAAGATTCTGAAGCCATTCGCAATGCAGTTCTGCGCTATGGCATTTCTCACCCAGTTGTCAATGATGGAGACATGTATCTTTGGCGGAAGTTGGGTATAAACTCATGGCCAACATTTGCTTTTGTTGGCCCCAACGGTAAGCTTCTTGCACAACTTGCAGGAGAGGGTCATAAGAAGTTTCCTGGAAAGCTAGCAATTGACGTCCTTAATAACAGGCTTTTTATTTCTGACAGCAACCACAACCGCATAGTTTACTATTGCAAGGAAGATGAAGTTTGTTTGTACCAGTCTTTGCTGTTTGAGGTCCCCTTCGAAGAGGGAGTTTCTAACCCTGCCAAAGCAGACGTCACTCTTGCACATTTTGTGAAACCCGAAACTTCAACCAGCAACTTCCTGCTGCGTGAACTGCATCCAATCCTTGCAGGTAAAGGCTTTTCGAACCTCCCCCCCAAGGTAAAAACGCCGATGGTTAAGAGATGGCAACGACCAAGCACTATTTGA 1515 0.398 MIGEANFLGGVASVKGIKGFDTEAAKTRFFEIYLDKCKSKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAASRILNVPPNECIVIEDALAGLQAAKAAQMRCIAVRTTLSDENLEPAGPTLIRDNIGSVSLDDILSGGSVGYNKRMQGSETLNNFAESSSTVLAGGLQGSRQDILRFGSLGIAISCLFFTISNWKAMQYASPKAVWNQFFGVTQPPLEQKEDNSRDDRIQQFENYISDLESRGNAQIVPEFPSKLEWLNTAPLQFLRDLKGKVVLLDFWTYCCINCMHVLQDLDVLEKKYKDMAFVVVGVHSAKFDNEKDSEAIRNAVLRYGISHPVVNDGDMYLWRKLGINSWPTFAFVGPNGKLLAQLAGEGHKKFPGKLAIDVLNNRLFISDSNHNRIVYYCKEDEVCLYQSLLFEVPFEEGVSNPAKADVTLAHFVKPETSTSNFLLRELHPILAGKGFSNLPPKVKTPMVKRWQRPSTI 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02129 504 Pfam Thioredoxin-like 291 385 IPR012336 -
Gma03g02129 504 Gene3D Glutaredoxin 237 409 - -
Gma03g02129 504 CDD HAD_BPGM-like 33 127 - -
Gma03g02129 504 ProSiteProfiles Thioredoxin domain profile. 262 418 IPR013766 -
Gma03g02129 504 Pfam Haloacid dehalogenase-like hydrolase 33 125 IPR041492 -
Gma03g02129 504 PANTHER NHL REPEAT-CONTAINING PROTEIN 2 422 469 - -
Gma03g02129 504 PANTHER NHL REPEAT-CONTAINING PROTEIN 2 45 397 - -
Gma03g02129 504 PANTHER NHL REPEAT-CONTAINING PROTEIN 2 397 422 - -
Gma03g02129 504 SUPERFAMILY HAD-like 34 148 IPR036412 -
Gma03g02129 504 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 68 125 IPR006439 -
Gma03g02129 504 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 37 50 IPR006439 -
Gma03g02129 504 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 87 107 IPR006439 -
Gma03g02129 504 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 69 85 IPR006439 -
Gma03g02129 504 SUPERFAMILY Thioredoxin-like 266 394 IPR036249 -
Gma03g02129 504 Gene3D - 29 156 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02129 Gma-Chr3 46787207 46801530 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02129 - - gsj:114407538 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02129 03 46787207 46801530 Gma03g02129 03 46787207 46801530 ECH
Gma19g02164 19 50491667 50507498 Gma03g02129 03 46787207 46801530 GST