Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02127 ATGTCTCTGCGACCTGGTTCTGGTTCTGCTTGGGCGACAAGGAAGAAAAGCTATAAGAGTGGAATTGACCCCCGAGAGATTCGGAGAAGGAGAGAAGAGGACCTCTTCGGCATCAGAAAAAACAAACGCCATGACACTCTCTTCAACAAACGAACACAGACTCATACTACCCATTCCCGCAATACGTTTTTGGAAGCTATTAGTGCCATGGTAGACCACATATGTTCTGAGTTCCCTCCCGCAGAATTGGAGAAAACACGTCACGCTGAAATTCTGTCATCACTAGCTGCTCAATGCCCTTCAATTGATGATGTCATTGAGCAAGGTATTGTCCCTCGCTTTGCGACGTTCTTGTCAAGGGACGATGCACCCCAATTGCAGTTAGGAGCTATATTGATTCTAACCAGTATTGCTTGTGGATCATCCCAACACAAAAGAGTTATCGTTGAACTCGGTCTTGTTCCCTCCTTTGTGAATCTTCTCAGCTCTAGTAGCAATGATGATATCAAAGAAGAGATAGTATGCGCTTTAGGGTTCATTGCCATTGATTCCCCGAGCTATAGGGATCTTGTTCTTAACCACGGTGTTCTTCTACCGTTATTATCTCTGTTGAACCCACTTCCAAGATTGTCTATGGTGAGGGTTACTACATGGACTTTATATAGTTTGGTCCGTGGAAAGCCTCCGGTGAATTTTGAACAGGTAAAGCCTGTCTTGCCTGTCCTTCATCAACTCATCCACCAGACCGATGAAGAAGTTGTAGCAGATGCATGCTTGGCTCTCTCTTACCTTTCAGAAGTCTCAATTGACAAAATTCAAGATATTATTGATGCAGGAGTTTGCCCAAAACTTGTGGAGCTTCTGCATAGGTGTCAATCAGATAAAGTTGTTTTACCAGCGCTTCGGACTCTAGGAAATATTGTTACTGGTGATGATGCTCAGACACAGGTTGTAATTGATAACGGAGTGCTCCCGTGTCTTTGCCAAGTTCTTACGCGTGAGTACAAAAAAATGATCCATAAAGAAGCTTGTTGGACAATCTCAAATATCGCAGGTGGGAATAGAGCTCAAATACAGGCTGTCATTAAGGCCAATATTATTCCTCCTCTTATTCAAATTCTTCAACATGCTGAGTTCGACGTCAAGAAGGAGTCTGCCTGGGCGATCTTGAGTATCACTGTTGGAGGATCTCGTGACCATATCAGgttcgtggcggctcaagGAGACGTACATATAGATGAGggaggtcttcgcctgccctga 1263 0.4252 MSLRPGSGSAWATRKKSYKSGIDPREIRRRREEDLFGIRKNKRHDTLFNKRTQTHTTHSRNTFLEAISAMVDHICSEFPPAELEKTRHAEILSSLAAQCPSIDDVIEQGIVPRFATFLSRDDAPQLQLGAILILTSIACGSSQHKRVIVELGLVPSFVNLLSSSSNDDIKEEIVCALGFIAIDSPSYRDLVLNHGVLLPLLSLLNPLPRLSMVRVTTWTLYSLVRGKPPVNFEQVKPVLPVLHQLIHQTDEEVVADACLALSYLSEVSIDKIQDIIDAGVCPKLVELLHRCQSDKVVLPALRTLGNIVTGDDAQTQVVIDNGVLPCLCQVLTREYKKMIHKEACWTISNIAGGNRAQIQAVIKANIIPPLIQILQHAEFDVKKESAWAILSITVGGSRDHIRFVAAQGDVHIDEGGLRLP 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02127 420 MobiDBLite consensus disorder prediction 1 24 - -
Gma03g02127 420 Pfam Armadillo/beta-catenin-like repeat 355 393 IPR000225 GO:0005515
Gma03g02127 420 Pfam Armadillo/beta-catenin-like repeat 141 178 IPR000225 GO:0005515
Gma03g02127 420 Pfam Armadillo/beta-catenin-like repeat 311 351 IPR000225 GO:0005515
Gma03g02127 420 Pfam Armadillo/beta-catenin-like repeat 271 308 IPR000225 GO:0005515
Gma03g02127 420 SUPERFAMILY ARM repeat 15 403 IPR016024 -
Gma03g02127 420 PANTHER IMPORTIN SUBUNIT ALPHA-4 3 409 - -
Gma03g02127 420 ProSiteProfiles IBB domain profile. 1 60 IPR002652 GO:0006606|GO:0061608
Gma03g02127 420 Pfam Importin beta binding domain 14 83 IPR002652 GO:0006606|GO:0061608
Gma03g02127 420 PANTHER IMPORTIN ALPHA 3 409 - -
Gma03g02127 420 Gene3D - 12 52 IPR036975 GO:0006606
Gma03g02127 420 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 279 322 IPR000225 GO:0005515
Gma03g02127 420 Gene3D - 65 412 IPR011989 -
Gma03g02127 420 SMART arm_5 227 266 IPR000225 GO:0005515
Gma03g02127 420 SMART arm_5 354 394 IPR000225 GO:0005515
Gma03g02127 420 SMART arm_5 184 225 IPR000225 GO:0005515
Gma03g02127 420 SMART arm_5 98 139 IPR000225 GO:0005515
Gma03g02127 420 SMART arm_5 268 309 IPR000225 GO:0005515
Gma03g02127 420 SMART arm_5 311 352 IPR000225 GO:0005515
Gma03g02127 420 SMART arm_5 141 182 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02127 Gma-Chr3 46769782 46773615 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02127 K15042 - gmx:100813229 750.355