Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02115 ATGTCTGTGTCTTTCTCTTCAACCTCGGTTTCGTTCTCGGAATCCTCATTTGCATTCCAAAGACCTGCTCCAGCACATCTTTGCTCAAATTCACTCACCGTTGCATCGAACAACTTTCATTCAGCAACAGGTGGTGGTCGTCTTGTGCTGAATGTTGGAGGCACCTGCTTGTGTCGAAAGTTTCGTGGTTTGAAACTGTGGCTACTTGAGAGACTCAGCTTCCAATTCCAGCCACCAAAGCAACCTAAGAATAGAAACCATCACTTCAGGAATAATTTGGAAAATGAAAAGGGATCGGTTTCTGATTCATCTTCAAATCTTCGTGTTCCTGATGATAAGGTCACTCCGGTGGAGTCTCTATCGTTGCTGCAGACAGGTTTGTCTGGTACTCCCGTGGATGTTGGCAGAAAGCCCTCACTTTGTATTGCTGTCATAGGAGCCACCGGTGAGCTGGCAAAGAGGAAGATTTTCCCTGCTTTGTTTGCCCTCTACTACAGTGGCTTTCTTCCCGAGAATGTAGGCATTTTTGGCTATTCAAGGAAGGATATAACTGATGAAGACCTGCGATCTATTATAGCTTCAACATTAACATGCCGAGTTGATCATCAAGAAAATTGTGACAACAAATTAGATGCTTTCCTTAGTAAAACATATTACATTAATGGAGGCTATGACAATAAATATGGAATGTCCATGCTGAATTCTCGAATGGAGCAAATTGAGGGAGGATCCAAAACCAACAGGATATTCTACCTTTCTGTGCCACAAGAAGCACTTTTGGATGTTGCTTCATGCCTTGCAAGCAGTGCTCAGACCCAGAACGGATGGAATCGCATAATATTTGAGAAGCCATTTGGCTTTGATGCACTTTCTTCCCATAGGCTGACACAATATATTCTTTCAAACTTTCAGGAAAAGCAAATATTTAGGATTGATCATCTACTAGGAAGGAATCTCATTGAAAATCTTACAGTTTTAAGGTTTTCAAATCTAGTTTTTGAGCCACTTTGGAGTCGTACTTACATAGATAATGTACAGCAGCTTAGTCCTCTGTTTACCCAATACCCATGCAGATATTTCAGTGGCTACGGAATTATCCGTGATATTGTTCACTGTCATGTGCTCCAAACAATTGCATTGCTTGCCATGGAACCACCAATAAGCCTTGATGGAGAAGATATTCGAAATGAAAAGCTCAAGGTTTTGAGGTTAATTTGCAAATTGGAGCCGAAGGATGTCATTCTTGGCCAATATAAAGCAAGTGGTGGAGCCAAAGTTGATGCATGCGTAAATGGTCTGACACCTACTTATTTTGCTGCTGCACTATACATTGACAATGCACGATGGGATGGTGTGCCATTTCTGATTAAAACAGGCTTGGGGCTCATCAAACACCAAATGGAGATTCGGATTCAATTTCGCAATGTTCCGGGGAATGTATACCATGAGTGCATCGGGCATAACAGGGACCGTGCCATAAATGAGCTCATTCTTCGGGATGTTCCTGATGAAGCTATTTTGGTGAGAGTGAACAATAAGGTTCCAGGACTAGGCCTGCAACTGGACTCTTCAGAATTAAATTTGCTTTACAAGGACAAGTACAACATGGAGGTGCCGGATTCATACGAGCATCTTCTTCTGGATGTCATTGATGGAGACAACCATTTGTTTATGAGAAGTGATGAGTTGGCAGCAGCGTGGACCATTCTAACTCCAATTCTGAATGAGATAGACAAGAACAATATGTCAGTGGAGCTTTATGAGATGGGGGGTCGCGGTCCTGTTGGGGCATACTACCTCTGGGCGAAACATGGTGTCCGTTGGGTGGAGGATTAA 1836 0.4281 MSVSFSSTSVSFSESSFAFQRPAPAHLCSNSLTVASNNFHSATGGGRLVLNVGGTCLCRKFRGLKLWLLERLSFQFQPPKQPKNRNHHFRNNLENEKGSVSDSSSNLRVPDDKVTPVESLSLLQTGLSGTPVDVGRKPSLCIAVIGATGELAKRKIFPALFALYYSGFLPENVGIFGYSRKDITDEDLRSIIASTLTCRVDHQENCDNKLDAFLSKTYYINGGYDNKYGMSMLNSRMEQIEGGSKTNRIFYLSVPQEALLDVASCLASSAQTQNGWNRIIFEKPFGFDALSSHRLTQYILSNFQEKQIFRIDHLLGRNLIENLTVLRFSNLVFEPLWSRTYIDNVQQLSPLFTQYPCRYFSGYGIIRDIVHCHVLQTIALLAMEPPISLDGEDIRNEKLKVLRLICKLEPKDVILGQYKASGGAKVDACVNGLTPTYFAAALYIDNARWDGVPFLIKTGLGLIKHQMEIRIQFRNVPGNVYHECIGHNRDRAINELILRDVPDEAILVRVNNKVPGLGLQLDSSELNLLYKDKYNMEVPDSYEHLLLDVIDGDNHLFMRSDELAAAWTILTPILNEIDKNNMSVELYEMGGRGPVGAYYLWAKHGVRWVED 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02115 611 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 325 608 IPR022675 GO:0004345|GO:0006006|GO:0050661
Gma03g02115 611 Gene3D Dihydrodipicolinate Reductase; domain 2 311 610 - -
Gma03g02115 611 PANTHER INACTIVE GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 4, CHLOROPLASTIC 115 611 - -
Gma03g02115 611 PRINTS Glucose-6-phosphate dehydrogenase signature 302 330 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gma03g02115 611 PRINTS Glucose-6-phosphate dehydrogenase signature 278 291 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gma03g02115 611 PRINTS Glucose-6-phosphate dehydrogenase signature 370 386 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gma03g02115 611 PRINTS Glucose-6-phosphate dehydrogenase signature 352 369 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gma03g02115 611 PRINTS Glucose-6-phosphate dehydrogenase signature 448 474 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gma03g02115 611 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 115 611 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gma03g02115 611 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 144 322 IPR022674 GO:0006006|GO:0016614|GO:0050661
Gma03g02115 611 MobiDBLite consensus disorder prediction 79 109 - -
Gma03g02115 611 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 137 325 IPR036291 -
Gma03g02115 611 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 312 609 - -
Gma03g02115 611 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 140 609 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gma03g02115 611 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 139 610 IPR001282 GO:0006006|GO:0016614|GO:0050661
Gma03g02115 611 Gene3D - 137 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02115 Gma-Chr3 46692914 46698878 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02115 K00036 - gmx:100811075 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02115 03 46692914 46698878 Gma03g02115 03 46692914 46698878 ECH
Gma19g02150 19 50378162 50383448 Gma03g02115 03 46692914 46698878 GST