Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02112 ATGGGGTTTCAAAACTTGGTATTGATGATTTTTATGATGACATTGGTTATTTGTCAATATGGGAATTGCAAGGATATAGTCAATCCTCATCATCACTTACACAAAAAAAACGTTACCAAAATACCTAATGATAATGGTTTCATTCAACGAAGTGATACCCATTTTCTTCTAAATGAAAAGTCACAATACTTCAACGGATTCAATGCCTATTGGTTAATGACTATGGCATCTGATCCGTCTACAATTTCTAAGGTCACTACAACTTTTCAAGAAGCATCCCAACACGGTTTGAACGTAGCAAGAACCTGGGCATTCAATGATGGAGGTTACAAAGCCCTTCAAATTTCTCCCGGTTATTATGATGAGAATGTTTTTAAGGGATTGGATTCTGTGATATCACAAGCAGGAAAGAATGGGGTATGGCTGATCCTAAGCCTAATAAATAATTGGAAAGATGGTGGTGGAAAAAATCAATATGTTCAATGGGCAAAGGAACATGGTCAAAAAGTAAACAACGAGGATGACTTCTTCTCACACCCCGTCATTAAGCAATACTACAAAAATCACGTCAAGACTATATTAACTAGAAAGAATACTATAACTGGATTAACATATAAAGATGATCCAACTATTTTTGCATGGGAGCTTATGAACGAACCTCGTTGTTCAGAGCTATCTGGAAAACAAATTCAGGATTGGGTGAGGGAGATGGCTGCCTATGTGAAGTCCATTGATAGCAATCACTTACTCCAAATAGGGCTTGAAGGATTTTATGGTGAATCGATGCCAGAAAGGAAGCAGTTCAATCCTGGATATCAAATAGGAACCGATTTCATTTCTAACAATCAAGTTCCGGAAATCGACTTTACCACCATCCATCTATACCCTCAGTGGATGTCTAGGTTTAATGAAACAGCCCAAGATGTCTTTATTAACAATTGGGTCCAAGTCCATATTCAAGACGCAAATGATGTTTTACGGAAACCCATTCTTCTTAGCGAGTTTGGGTTATCTTCAAAGATTTCAGGATATGGCGTGGAGAAAAGGAATAGTTTGTTTGAGAAACTATACAATTTGATATACAAGAGTGCAAGTAACAGGGGGTCATGTGCAGGAGGGCTTTTTTGGCAACTACTGGCCAAAGGAATGGATGACTTTCGTGATGGCTATGAAGTCGTTTTTGAAGAGACTCCTTCAACTACCAATATCATTACTAAACAATCTAAGAAGATGTCAAGTCTTGCATAA 1248 0.3766 MGFQNLVLMIFMMTLVICQYGNCKDIVNPHHHLHKKNVTKIPNDNGFIQRSDTHFLLNEKSQYFNGFNAYWLMTMASDPSTISKVTTTFQEASQHGLNVARTWAFNDGGYKALQISPGYYDENVFKGLDSVISQAGKNGVWLILSLINNWKDGGGKNQYVQWAKEHGQKVNNEDDFFSHPVIKQYYKNHVKTILTRKNTITGLTYKDDPTIFAWELMNEPRCSELSGKQIQDWVREMAAYVKSIDSNHLLQIGLEGFYGESMPERKQFNPGYQIGTDFISNNQVPEIDFTTIHLYPQWMSRFNETAQDVFINNWVQVHIQDANDVLRKPILLSEFGLSSKISGYGVEKRNSLFEKLYNLIYKSASNRGSCAGGLFWQLLAKGMDDFRDGYEVVFEETPSTTNIITKQSKKMSSLA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02112 415 Pfam Cellulase (glycosyl hydrolase family 5) 66 340 IPR001547 GO:0004553|GO:0071704
Gma03g02112 415 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 9 414 - -
Gma03g02112 415 PANTHER - 9 414 IPR045053 GO:0004553
Gma03g02112 415 SUPERFAMILY (Trans)glycosidases 46 393 IPR017853 -
Gma03g02112 415 Gene3D Glycosidases 43 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02112 Gma-Chr3 46671603 46674865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02112 46 412 Glycoside Hydrolase AT5G66460 54.743 2.43e-149 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02112 K19355 - gmx:100788081 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g02146 19 50348542 50351775 Gma03g02112 03 46671603 46674865 GST