Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02110 ATGGCGAGGAAGAAGATCAGAGAGTACCACTCCAAGAGGCTTCTCAAGGAGCATCTCAAACGTCTCGCCTCTATCGACCTCCAAATCCTCTCAGCTCAGGTGACAGAATCTACGGATTTCACTGAGCTGACAGACCAGCATCCATGGCTTTCGTCAACCAGATTGGTCGTCAAGCCAGACATGCTGTTCGGGAAGCGCGGCAAGAGTGGCTTAGTTGCTCTCAATTTAGACATAGCTCAAGTCGCCGAGTTCGTCAAAGCACGCCTCGGCGTTGAGGTTGAGATGGGAGGTTGCAAGGCGCCTATAACCACTTTTATTGTCGAACCGTTTGTTCCTCACGACCAAGAGTTTTATCTGTCTATTGTTTCTGAAAGGCTTGGCTCCACTATCAGCTTCTCCGAATGTGGCGGCATTGAAATTGAAGAGAATTGGGATAAGGTCAAAACTATATTCCTTCCGACGGAAAAACCATTGACTCCGGAGGCATGTGCGCCATTGATTGCTATACTTCCTTTGGAGATTCGGGGGACAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTCAAAGATCTGGACTTCAGTTTTTTAGAGATGAATCCATTTACACTGGTGAATGAAAAGCCATATCCACTGGATATGAGAGGGGAATTGGATGACACTGCCGCATTCAAGAACTTCAACAAGTGGGGTAATATAGAATTTCCATTGCCTTTTGGAAGAATTCTGAGCCCTACAGAAAGCTTCATTCATTCCTTGGATGATAAGACAAGTGCATCATTGAAATTTACTATATTGAATCCAAAAGGACGCATATGGACAATGGTAGCAGGAGGTGGTGCAAGTGTAATTTATGCTGATACGGTCGGAGATTTAGGCTATGCATCAGAGCTAGGAAACTATGCTGAGTATAGTGGAGCTCCGAATGAGGAGGAGGTGTTGCAGTATGCAAGAGTTGTAATTGATTGTGCTACTGAAGACCCCGATGGCCGTAAGAGAGCCCTTCTTATTGGAGGTGGCATAGCAAACTTCACTGATGTTGCTGCCACATTCAACGGGATTATTCGAGCCCTGAAAGAGAAGGAATCAAAGCTTAAAGCAGCGCAAATGCACATATATGTCAGAAGAGGTGGTCCAAACTACCAGACTGGTTTGGCAAAGATGCGTGCATTGGGGGAGGAGTTGGGAGTACCAATTCAGGTTTATGGACCGGAGGCCACGATGACGGGTATCTGCAAACAAGCTATTGATTGCATCATGTCCGAAGCATAA 1272 0.4591 MARKKIREYHSKRLLKEHLKRLASIDLQILSAQVTESTDFTELTDQHPWLSSTRLVVKPDMLFGKRGKSGLVALNLDIAQVAEFVKARLGVEVEMGGCKAPITTFIVEPFVPHDQEFYLSIVSERLGSTISFSECGGIEIEENWDKVKTIFLPTEKPLTPEACAPLIAILPLEIRGTIGDFIMGVFAVFKDLDFSFLEMNPFTLVNEKPYPLDMRGELDDTAAFKNFNKWGNIEFPLPFGRILSPTESFIHSLDDKTSASLKFTILNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATEDPDGRKRALLIGGGIANFTDVAATFNGIIRALKEKESKLKAAQMHIYVRRGGPNYQTGLAKMRALGEELGVPIQVYGPEATMTGICKQAIDCIMSEA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02110 423 Gene3D - 240 422 IPR016102 -
Gma03g02110 423 PANTHER ATP-CITRATE SYNTHASE 1 423 - -
Gma03g02110 423 Pfam ATP-grasp domain 6 203 IPR013650 -
Gma03g02110 423 Gene3D - 1 233 - -
Gma03g02110 423 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 3 1 423 - -
Gma03g02110 423 Pfam ATP citrate lyase citrate-binding 242 417 IPR032263 -
Gma03g02110 423 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
Gma03g02110 423 SUPERFAMILY Succinyl-CoA synthetase domains 259 403 IPR016102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02110 Gma-Chr3 46643290 46647012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02110 1 420 Acyl Lipid Metabolism Gene Families AT1G09430 88.095 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02110 K01648 - gmx:100787551 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma03g02110 03 46643290 46647012 Gma03g02110 03 46643290 46647012 ECH
Gma19g02144 19 50327295 50329102 Gma03g02110 03 46643290 46647012 GST