Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma03g02051 ATGCCGAAACAAAGGTTGGAGGGTAAGGTGGCTCTTATCACTGGAGCAGCAAGTGGGATTGGAGAAGAGACAGTGAGATTGTTCGCTGAACATGGAGCACTTATTGTTGCAGCAGATATTCAAGATGAACAAGGCCACCAAGTTGCAGCTTCAATAGGGTCAGAGAGAGTGACCTACCACCATTGTGATGTGAGAGATGAAAACCAAGTTGAAGAAACAATCAAGTTCACTTTGGAAAAACATGGTCGCATAGATGTTTTGTTCAGCAACGCGGGAATAATAGGTTCCTTATCTGGGATCCTTGACCTTGATCTGAATGAGTTTGACAACACAATTGCCACAAATGTTCGCGGTGTAGCCGCCACGATTAAGCACACGGCACGTGCCATGGTTGCTAAAAGCACCCGTGGATCCATCATATGCACCACAAGTGTGGCTGCTATGATTGGTGGAACTGGACCTCATGGCTATACCACATCAAAACATGCTCTTCTGGGGTTGGTGAAATCAGCTTGTAGTGAACTTGGTGCTTATGGAATAAGAGTTAATAGCATATCCCCTTTTGGAGTTGCAACACCTCTTGCATGCAAAGCTTTCAACTTTGAACCTGAGCAAGTTGAAGCTAATAGCTGCTCACAGGCTAATCTAAAAGGTGTTGTGTTGAAGGCTAGGCATATAGCTGAAGCAGCTTTGTTTCTTGCTTCTGATGATGCTGTTTACATCAGTGGTCACAACTTGGTGGTGGATGGTGGCTTCTCTATGGTTAATAGAAGTTATTCCTTCACACCAGCTTAA 795 0.4453 MPKQRLEGKVALITGAASGIGEETVRLFAEHGALIVAADIQDEQGHQVAASIGSERVTYHHCDVRDENQVEETIKFTLEKHGRIDVLFSNAGIIGSLSGILDLDLNEFDNTIATNVRGVAATIKHTARAMVAKSTRGSIICTTSVAAMIGGTGPHGYTTSKHALLGLVKSACSELGAYGIRVNSISPFGVATPLACKAFNFEPEQVEANSCSQANLKGVVLKARHIAEAALFLASDDAVYISGHNLVVDGGFSMVNRSYSFTPA 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma03g02051 264 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Gma03g02051 264 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Gma03g02051 264 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Gma03g02051 264 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Gma03g02051 264 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Gma03g02051 264 PRINTS Glucose/ribitol dehydrogenase family signature 216 236 IPR002347 -
Gma03g02051 264 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B 3 260 - -
Gma03g02051 264 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 255 IPR036291 -
Gma03g02051 264 Pfam Enoyl-(Acyl carrier protein) reductase 15 253 - -
Gma03g02051 264 Gene3D - 1 260 - -
Gma03g02051 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Gma03g02051 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Gma03g02051 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Gma03g02051 264 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 3 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma03g02051 Gma-Chr3 46087764 46089147 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma03g02051 2 254 Acyl Lipid Metabolism Gene Families AT3G55290 30.597 9.45e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma03g02051 - - gmx:100811279 516.924